PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023870503.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

FAR1

Protein Properties

Length: 827aa MW: 95552 Da PI: 7.0476

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023870503.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	88.5	9.6e-28	64	151	1	91
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 +fY+eYAk++GF++++++s++sk+++e+++++f Cs++g + e+++ ++r+ ++++t+Cka+++vk++ dgkw ++++ +eHnHel p XP_023870503.1 64 SFYQEYAKSMGFTTSIKNSRRSKKSKEFIDAKFACSRYGVTPESDSG---SSRRPSVKKTDCKASMHVKRRADGKWIIHEFIKEHNHELLP 151 5**************************************999888...7788889*****************************975 PP

Sequence ? help Back to Top
Protein Sequence Length: 827 aa Download sequence
MVDCQDNVLS ARVNENIGDF VDEVHNRDVG VVSSPKRDVA MFEGDTDFEP RNGIEFESHE 60 AAYSFYQEYA KSMGFTTSIK NSRRSKKSKE FIDAKFACSR YGVTPESDSG SSRRPSVKKT 120 DCKASMHVKR RADGKWIIHE FIKEHNHELL PALAYHFRIH RNVKLAEKNN IDILHAVSER 180 TRKMYVEMSR QSGGYQNLGF LQGDINYQFD KGRYLTLDEG DAQVMLEYFK RIQKENPNFF 240 YAMDLNEEQR LRNLFWVDAK SRHDYISFSD VVSFDTSYIK SNDKLPFAPF VGVNHHFQSM 300 LFGCALVADE TRSTFVWLMK TWLRAMGGQA PKVIITDQDK ALKAAIEEVF PNTRHFFSLW 360 NILEKIPETL AHVIKQHENF LPKFNKCILK SWTDEQFDMR WWKIVTRFEL QDDEWIQSLY 420 EDRKKWVPIY MGDSFLAGMS TPQRSESMNA FFDKYIHKKI TLKEFVKQYG TILQNRYEEE 480 AIADFDTWHK QPALKSPSPW EKQLSTVYTH AIFKKFQVEV LGVVGCHPKK ESEDGTTTTF 540 RVQDCEKDEY FMVLWNETRS EVSCFCHLFE YKGFLCRHSM IVLQICGLSS IPPHYILKRW 600 TKDAKNRETV VEGTERMQTR VQRYNDLCKR AIELSEEGSL SEESYSISFR ALVEALKNCV 660 NVNNISISAA ESSGNGLVLR EEEESRGSLG AKTTKKKSAY KKRKVPVEPD VLLVEPQDSL 720 QQMDNLSSDG MTLTGYYGAQ QNVQGLQLNL MEPPHDGYYV NQHSIQGLGQ LNSIAPSHDG 780 FFGTQQSMHG LGQLDFRPPA NFSYSLQLQD EPHLRTTQLH GSASRHA

Sequence ? help Back to Top

Protein Sequence Length: 827 aa Download sequence

MVDCQDNVLS ARVNENIGDF VDEVHNRDVG VVSSPKRDVA MFEGDTDFEP RNGIEFESHE  60
AAYSFYQEYA KSMGFTTSIK NSRRSKKSKE FIDAKFACSR YGVTPESDSG SSRRPSVKKT  120
DCKASMHVKR RADGKWIIHE FIKEHNHELL PALAYHFRIH RNVKLAEKNN IDILHAVSER  180
TRKMYVEMSR QSGGYQNLGF LQGDINYQFD KGRYLTLDEG DAQVMLEYFK RIQKENPNFF  240
YAMDLNEEQR LRNLFWVDAK SRHDYISFSD VVSFDTSYIK SNDKLPFAPF VGVNHHFQSM  300
LFGCALVADE TRSTFVWLMK TWLRAMGGQA PKVIITDQDK ALKAAIEEVF PNTRHFFSLW  360
NILEKIPETL AHVIKQHENF LPKFNKCILK SWTDEQFDMR WWKIVTRFEL QDDEWIQSLY  420
EDRKKWVPIY MGDSFLAGMS TPQRSESMNA FFDKYIHKKI TLKEFVKQYG TILQNRYEEE  480
AIADFDTWHK QPALKSPSPW EKQLSTVYTH AIFKKFQVEV LGVVGCHPKK ESEDGTTTTF  540
RVQDCEKDEY FMVLWNETRS EVSCFCHLFE YKGFLCRHSM IVLQICGLSS IPPHYILKRW  600
TKDAKNRETV VEGTERMQTR VQRYNDLCKR AIELSEEGSL SEESYSISFR ALVEALKNCV  660
NVNNISISAA ESSGNGLVLR EEEESRGSLG AKTTKKKSAY KKRKVPVEPD VLLVEPQDSL  720
QQMDNLSSDG MTLTGYYGAQ QNVQGLQLNL MEPPHDGYYV NQHSIQGLGQ LNSIAPSHDG  780
FFGTQQSMHG LGQLDFRPPA NFSYSLQLQD EPHLRTTQLH GSASRHA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G15090.1	0.0	FAR1 family protein