PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023870501.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

FAR1

Protein Properties

Length: 847aa MW: 97624.2 Da PI: 6.8363

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023870501.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	85.5	8e-27	89	191	1	91
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk............tekerrtraetrtgCkaklkvkkekdgkwevtklel 83 +fY+eYA+++GF++ +++s++sk+++e+++++f Cs++g+++e +k+ e++ +r+ ++t+Cka+++vk++ dgkw+++++++ XP_023870501.1 89 SFYQEYARSMGFNTAIQNSRRSKTSREFIDAKFACSRYGTKREYDKSynrprarqnkpdIENATGRRSCSKTDCKASMHVKRRPDGKWVIHSFVK 183 5****************************************9999999998887776666666999*********************** PP FAR1 84 eHnHelap 91 eHnHel p XP_023870501.1 184 EHNHELLP 191 ***975 PP

Sequence ? help Back to Top
Protein Sequence Length: 847 aa Download sequence
MDIDLRLPSG EHDKEDEEPN AIDNILNGDE KLHNGDIEGE NMVDVGVDVH VEDGGDLNSP 60 TVDMGVFKED TNLEPLSGME FESHGEAYSF YQEYARSMGF NTAIQNSRRS KTSREFIDAK 120 FACSRYGTKR EYDKSYNRPR ARQNKPDIEN ATGRRSCSKT DCKASMHVKR RPDGKWVIHS 180 FVKEHNHELL PAQAVSEQTR KMYAAMARQF AEYKNVVGLK NDPKNPFDKG RNLALETGDA 240 KILLDFFLQM QNINSNFFYA IDLGEDQRLK NLFWVDAKSR HDYNTFSDVV SFDTTYVRNK 300 YKMPLALFIG VNQHYQFMLL GCALISDESV NTFSWLMQTW LKAMGGQAPK VLITDHDKAM 360 KSAVLEVFPD TRHCFCLWHI LGKVSENLGH IMKRHESFMA KFEKCIHRSW TNEEFEKRWW 420 KILERFELKE DEWMQSLYDD RKLWVPTYMK DVCLAGMSTV QRSESVNSFF DKFVHKKTTV 480 QEFVKQYELI LQDRYEEEAK ADSDTWNKQP TLKSPSPLEK SVSVVYTHAV FKKFQAELLG 540 VVACHPKKER QDEAITTFRV QEFDRSQDFM VIWNEMKSEI SCICRLYEYK GYLCRHAMIV 600 LQICGLSAIP SQYILKRWTK DAKSRHLLGE VSELVQSRMQ RYNDICQRAM KLSEEGSLSQ 660 ESYSFAIRTL DEAFGSCVSM NNSSKSLTEV GTSDTHGLLC IEEDNQSRSM GRTNKKKNPT 720 KKRKVNSESD VMTVSTQDSL QQMDKISSRA VTLDSYYGTQ QSMQGMVQLN LMAPTRDTYY 780 GNQQTIQGLG QLNSIAPSHD GYYSAQQSMH GLGQMDFFRT PTGFTYGIRD DPNVRAAQLH 840 DDASRHA

Sequence ? help Back to Top

Protein Sequence Length: 847 aa Download sequence

MDIDLRLPSG EHDKEDEEPN AIDNILNGDE KLHNGDIEGE NMVDVGVDVH VEDGGDLNSP  60
TVDMGVFKED TNLEPLSGME FESHGEAYSF YQEYARSMGF NTAIQNSRRS KTSREFIDAK  120
FACSRYGTKR EYDKSYNRPR ARQNKPDIEN ATGRRSCSKT DCKASMHVKR RPDGKWVIHS  180
FVKEHNHELL PAQAVSEQTR KMYAAMARQF AEYKNVVGLK NDPKNPFDKG RNLALETGDA  240
KILLDFFLQM QNINSNFFYA IDLGEDQRLK NLFWVDAKSR HDYNTFSDVV SFDTTYVRNK  300
YKMPLALFIG VNQHYQFMLL GCALISDESV NTFSWLMQTW LKAMGGQAPK VLITDHDKAM  360
KSAVLEVFPD TRHCFCLWHI LGKVSENLGH IMKRHESFMA KFEKCIHRSW TNEEFEKRWW  420
KILERFELKE DEWMQSLYDD RKLWVPTYMK DVCLAGMSTV QRSESVNSFF DKFVHKKTTV  480
QEFVKQYELI LQDRYEEEAK ADSDTWNKQP TLKSPSPLEK SVSVVYTHAV FKKFQAELLG  540
VVACHPKKER QDEAITTFRV QEFDRSQDFM VIWNEMKSEI SCICRLYEYK GYLCRHAMIV  600
LQICGLSAIP SQYILKRWTK DAKSRHLLGE VSELVQSRMQ RYNDICQRAM KLSEEGSLSQ  660
ESYSFAIRTL DEAFGSCVSM NNSSKSLTEV GTSDTHGLLC IEEDNQSRSM GRTNKKKNPT  720
KKRKVNSESD VMTVSTQDSL QQMDKISSRA VTLDSYYGTQ QSMQGMVQLN LMAPTRDTYY  780
GNQQTIQGLG QLNSIAPSHD GYYSAQQSMH GLGQMDFFRT PTGFTYGIRD DPNVRAAQLH  840
DDASRHA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G22170.2	0.0	FAR1 family protein