PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026461089.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

CO-like

Protein Properties

Length: 500aa MW: 57012.1 Da PI: 5.7375

Description

CO-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026461089.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-B_box	19.3	2.4e-06	12	51	4	37
zf-B_box 4 rkCpeHeekelqlfCedCqqllCedClleeHkg......H 37 C+ ++e ++l+C+ ++ lC +C + H+ H XP_026461089.1 12 SACDYCNESVAILYCRADSAKLCLSCDYHVHSAndlskkH 51 67**************************999655555555 PP
2	zf-B_box	18.1	5.7e-06	54	96	3	41
zf-B_box 3 erkCpeHeekelqlfCedCqqllCedClleeHkg.....Htvvp 41 ++C+ +++k+++ C + lC+dC + +H + H++++ XP_026461089.1 54 SQICDICNSKPVSVRCVHENLVLCPDCDFDSH-DvnsnhHQRCQ 96 579*****************************.44567788776 PP
3	CCT	62.8	1e-21	448	492	1	45
CCT 1 ReaallRYkeKrktRkFeKkirYesRKavAesRpRvKGrFvkqae 45 R +a+lRYkeK+ktR++eK+irYesRKa+A++R RvKGrFvk++e XP_026461089.1 448 RGNAMLRYKEKKKTRRYEKHIRYESRKARADTRRRVKGRFVKSNE 492 7789**************************************975 PP

Sequence ? help Back to Top
Protein Sequence Length: 500 aa Download sequence
MEEQKKKVEK RSACDYCNES VAILYCRADS AKLCLSCDYH VHSANDLSKK HIRSQICDIC 60 NSKPVSVRCV HENLVLCPDC DFDSHDVNSN HHQRCQIEGV TGTPSPLTLA ENWGFDLNDL 120 DVANRKQRKK NEFEDEKNGD SLLSRDSMFQ NWSNLDSILS VDSSWMYKSS SNNNTSSMMG 180 FQDLMVPNEN NSRNFNNHNN SSALFPNVPC AEKKKQQSNQ ICGKYKNVML KQLIELITRD 240 PVDDGGGGDD EFSNEDWKKG DNDSSNGVND ETMDGINDSL QQQIPFTSLL MLPVRSDVKG 300 SAANNEDNFW DCMPQSEQSS QIWDFNLGRS RGNEERNQRE VEYGTNDPEY LMESYSKFIR 360 QPSFTTSAML DEPYRGNYSS MLEDNESQIA NQGLTTSGSN SISKRTQFSG SIVPKSESYS 420 YMEQPFLVKG DIVRATTKAD MELLAQNRGN AMLRYKEKKK TRRYEKHIRY ESRKARADTR 480 RRVKGRFVKS NEVPNVENCS

Sequence ? help Back to Top

Protein Sequence Length: 500 aa Download sequence

MEEQKKKVEK RSACDYCNES VAILYCRADS AKLCLSCDYH VHSANDLSKK HIRSQICDIC  60
NSKPVSVRCV HENLVLCPDC DFDSHDVNSN HHQRCQIEGV TGTPSPLTLA ENWGFDLNDL  120
DVANRKQRKK NEFEDEKNGD SLLSRDSMFQ NWSNLDSILS VDSSWMYKSS SNNNTSSMMG  180
FQDLMVPNEN NSRNFNNHNN SSALFPNVPC AEKKKQQSNQ ICGKYKNVML KQLIELITRD  240
PVDDGGGGDD EFSNEDWKKG DNDSSNGVND ETMDGINDSL QQQIPFTSLL MLPVRSDVKG  300
SAANNEDNFW DCMPQSEQSS QIWDFNLGRS RGNEERNQRE VEYGTNDPEY LMESYSKFIR  360
QPSFTTSAML DEPYRGNYSS MLEDNESQIA NQGLTTSGSN SISKRTQFSG SIVPKSESYS  420
YMEQPFLVKG DIVRATTKAD MELLAQNRGN AMLRYKEKKK TRRYEKHIRY ESRKARADTR  480
RRVKGRFVKS NEVPNVENCS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G33500.2	3e-62	CO-like family protein