PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026461048.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

bHLH

Protein Properties

Length: 453aa MW: 50447.9 Da PI: 4.7036

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026461048.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	36.7	7.3e-12	270	313	6	54
HHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS HLH 6 nerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54 ++ErrRR+++N+++ Lr+++Pk + K++ a+iL A+eY+k+L XP_026461048.1 270 LMAERRRRKKLNDRLYMLRSVVPKiS------KMDRASILGDAIEYLKEL 313 589*******************66......**************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 453 aa Download sequence
MLPVPGFNNG VAWIEQAEEK EEPISWMRNN KEQVVEGDEL VPMSSFKLML EDDLFMNNNN 60 NPLLLHQNHE TKDLSFSSLL NVICNNPLEN NFDLSCYPEF LPPLQINHNG FTNLTSQEEM 120 GSSNLIPLPE NVVNLTGFQE PFSLKPLEID FGQTYRAFSQ ADSSKWVEPT LFQKRIAAIK 180 QNLATPVNGG LGFFSCSDNN GQSSVMMEDD VKGKLELLGG EQEKSVDGSC LNYDSDEGNE 240 NGNSKNENST IVTGGDQKGK NRKGAPAKNL MAERRRRKKL NDRLYMLRSV VPKISKMDRA 300 SILGDAIEYL KELLQRINNL QNELETTPPD SSTQSTVHPS TSTPATLTSR VKEELCPITL 360 PSPNGQPTRV EVRLSEGKGV NIHMFCARRP GLLFSIIRAL DDLGLDIEQA VISCFEGFSL 420 DVFRAEQRKE GSDLLPEHIK SILLDSAGFH GVM

Sequence ? help Back to Top

Protein Sequence Length: 453 aa Download sequence

MLPVPGFNNG VAWIEQAEEK EEPISWMRNN KEQVVEGDEL VPMSSFKLML EDDLFMNNNN  60
NPLLLHQNHE TKDLSFSSLL NVICNNPLEN NFDLSCYPEF LPPLQINHNG FTNLTSQEEM  120
GSSNLIPLPE NVVNLTGFQE PFSLKPLEID FGQTYRAFSQ ADSSKWVEPT LFQKRIAAIK  180
QNLATPVNGG LGFFSCSDNN GQSSVMMEDD VKGKLELLGG EQEKSVDGSC LNYDSDEGNE  240
NGNSKNENST IVTGGDQKGK NRKGAPAKNL MAERRRRKKL NDRLYMLRSV VPKISKMDRA  300
SILGDAIEYL KELLQRINNL QNELETTPPD SSTQSTVHPS TSTPATLTSR VKEELCPITL  360
PSPNGQPTRV EVRLSEGKGV NIHMFCARRP GLLFSIIRAL DDLGLDIEQA VISCFEGFSL  420
DVFRAEQRKE GSDLLPEHIK SILLDSAGFH GVM

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	273	280	ERRRRKKL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G26744.1	1e-101	bHLH family protein