PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026461037.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family ARF
Protein Properties Length: 806aa    MW: 90067.3 Da    PI: 6.3382
Description ARF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026461037.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B374.51.2e-23171272199
                     EEEE-..-HHHHTT-EE--HHH.HTT......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSE CS
              B3   1 ffkvltpsdvlksgrlvlpkkfaeeh......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrse 89 
                     f+k+lt sd++++g +++ +++a+e+      + + + +++l+ +d++g++W++++i+r++++r++l++GW+ Fv++++L +gD ++F   + ++
  XP_026461037.1 171 FCKTLTASDTSTHGGFSVLRRHADEClplldmSRQ-PPTQELIAKDLHGNEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFL--RGEN 262
                     99*****************************7333.34459************************************************..4499 PP

                     E..EEEEE-S CS
              B3  90 felvvkvfrk 99 
                     +el+v+v+r+
  XP_026461037.1 263 GELRVGVRRA 272
                     99*****996 PP
2Auxin_resp115.54.7e-38297379183
      Auxin_resp   1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 
                     a+ha+st+++F+v+Y+Pr+s+ eF+v++ ++++++k++ s+GmRfkm+fe+e+++e+r++Gt+vg+ d+dp rW++SkWr+Lk
  XP_026461037.1 297 AWHAVSTGTMFTVYYKPRTSPEEFIVPYGQYMESVKNSHSIGMRFKMRFEGEEAPEQRFTGTIVGTGDADPNRWNGSKWRCLK 379
                     89*******************************************************************************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 806 aa     Download sequence    
MASPEVSSKG NYNNIGVESF SSANCTTEPK DVVVVGGIIR NGSASLIEPP TNVCKRKLDC  60
DEDALYSELW HACAGPLVTV PREGDLVFYF PQGHIEQVEA STNQVADQQM PVYDLPTKIL  120
CRVINVQLKA EADTDEVFAQ VTLLPEGNQD ENLMEKETVP QSSPRPLVHS FCKTLTASDT  180
STHGGFSVLR RHADECLPLL DMSRQPPTQE LIAKDLHGNE WRFRHIFRGQ PRRHLLQSGW  240
SVFVSSKRLV AGDAFIFLRG ENGELRVGVR RAMRQQSNIS SSVISSHSMH LGVLATAWHA  300
VSTGTMFTVY YKPRTSPEEF IVPYGQYMES VKNSHSIGMR FKMRFEGEEA PEQRFTGTIV  360
GTGDADPNRW NGSKWRCLKV RWDETSSVPR PERVSPWKVE PALSPPALNP LPVPRSKRPR  420
TNMVPSSPDS SVLTREDDGK TIQRRIQLDI SSPQMKYESP YTDLLSGFLG SKDSHHGFHP  480
RFVDRNLGNA NPLKKHFQDK EGQFNLLPSS QPMSSSLDVM ESGRKVLTQD GNLQSQTGSA  540
RYTGLSWFPE MRSPRVEQQP GNWLMSLLPQ SDSEDPPHST EVTPKVAVLE QYESVRAKGD  600
SDYKLFGISL FSSPVGLEAP KLSSDKMNEA GGHMHPLLLH LQASHPDQQS DQQEKLPRTC  660
QQPKNVPSNH KGGTTRSCTK VQMQGIALGR SVDLTKFNGY DELIAELDQM FDFNGGLMAT  720
NKNWQVVYTD NEGDMMLVGD DPWQEFCSMV RKICIYTRDE VQRMNSGTSS PRIEEETQLV  780
EEEKVVVATA NETKDVHSSA TSLQNC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G62000.30.0ARF family protein