PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026460571.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

bHLH

Protein Properties

Length: 799aa MW: 89126.1 Da PI: 5.4316

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026460571.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	33.3	9e-11	480	523	7	55
HHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS HLH 7 erErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 +Er+RR+++ +++ +Lr l+P+ + K++ a+iL A+eY+++Lq XP_026460571.1 480 VAERKRRKKLSDRLYKLRALVPNiS------KMDRAAILGDAIEYVQELQ 523 68*******************66......****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 799 aa Download sequence
MLVMDIVNNE QVVHSLMEKL RPLVGSQGGG SCWDYCVLWK LMWAEDHSPP PHLHHHLDQS 60 CCRFIEWVSC CCGGAGADVD RNISITGEAE LLMFPVSDHH HQRHPCRDLM FQHSRTKNCD 120 LLAKLPSTIP LMDSDDHGTG VHAQSLISNQ PAWITNVPNC SIQLTQSSFS SEETIGTRVL 180 IPVPGEGGGL IEFFAAKHVP EDPQLIEFVM THCNLSWEEQ QQETAIMLMN TTPATYHHDH 240 YHLLDHQHRQ PIADDDGRFQ QNVSSGNDNY DNDNGLANPA AMSNINNFNN SNLPWDLSVD 300 RIRLTSSSSS SPLNFFGCGL SSSGTQHQEQ VDGNAVLDSP IMDDKAHHNI SGFADIINVP 360 LLQESLMNTV DATNLHFGSS ANNNIEYSMS SLMPTTTPIK GSPSNHLATV GKAGTDNRDP 420 ENKLVGLDTG RADSVLSGCS NDRIIEGEDD DDNNTTNNQD GGGGRSSAGS GRPHQSKNLV 480 AERKRRKKLS DRLYKLRALV PNISKMDRAA ILGDAIEYVQ ELQKQVKDLQ DELEDQPSGD 540 HDQHLQDDYN ERRKNNKQQQ ISSCLQLQFD HHQNGTSGWP TANDQYQYDH QTVAATGSKI 600 GLADNNHQHQ QYLAGTTAAR CSSITNNNNN NSNIVINCSQ QPLNNNQQSS STPTWEDSHG 660 DDKQQTQQME PQVEVNQIER NEFFLKVLCE HKPGGFRRLM EAMNSLGLEV TNANVTTFRS 720 LVLNVFKVEK RDNDEMVQAD HVRDSLLEIT RDRMMGGWPK QTVDDQVGLD INSNYDHDQH 780 HEHGYGCHPI SLLHHHHQG

Sequence ? help Back to Top

Protein Sequence Length: 799 aa Download sequence

MLVMDIVNNE QVVHSLMEKL RPLVGSQGGG SCWDYCVLWK LMWAEDHSPP PHLHHHLDQS  60
CCRFIEWVSC CCGGAGADVD RNISITGEAE LLMFPVSDHH HQRHPCRDLM FQHSRTKNCD  120
LLAKLPSTIP LMDSDDHGTG VHAQSLISNQ PAWITNVPNC SIQLTQSSFS SEETIGTRVL  180
IPVPGEGGGL IEFFAAKHVP EDPQLIEFVM THCNLSWEEQ QQETAIMLMN TTPATYHHDH  240
YHLLDHQHRQ PIADDDGRFQ QNVSSGNDNY DNDNGLANPA AMSNINNFNN SNLPWDLSVD  300
RIRLTSSSSS SPLNFFGCGL SSSGTQHQEQ VDGNAVLDSP IMDDKAHHNI SGFADIINVP  360
LLQESLMNTV DATNLHFGSS ANNNIEYSMS SLMPTTTPIK GSPSNHLATV GKAGTDNRDP  420
ENKLVGLDTG RADSVLSGCS NDRIIEGEDD DDNNTTNNQD GGGGRSSAGS GRPHQSKNLV  480
AERKRRKKLS DRLYKLRALV PNISKMDRAA ILGDAIEYVQ ELQKQVKDLQ DELEDQPSGD  540
HDQHLQDDYN ERRKNNKQQQ ISSCLQLQFD HHQNGTSGWP TANDQYQYDH QTVAATGSKI  600
GLADNNHQHQ QYLAGTTAAR CSSITNNNNN NSNIVINCSQ QPLNNNQQSS STPTWEDSHG  660
DDKQQTQQME PQVEVNQIER NEFFLKVLCE HKPGGFRRLM EAMNSLGLEV TNANVTTFRS  720
LVLNVFKVEK RDNDEMVQAD HVRDSLLEIT RDRMMGGWPK QTVDDQVGLD INSNYDHDQH  780
HEHGYGCHPI SLLHHHHQG

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	482	489	ERKRRKKL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G16910.1	1e-38	bHLH family protein