PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_026460543.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
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Family | HD-ZIP | ||||||||
Protein Properties | Length: 164aa MW: 19214.7 Da PI: 9.3205 | ||||||||
Description | HD-ZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 61.4 | 1.4e-19 | 75 | 129 | 3 | 57 |
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHHC CS Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakekk 57 k++++t+ q++ Le+ F ++++ e++ +LA++lgL+ rqV vWFqNrRa++k+ XP_026460543.1 75 KKRKLTDLQVTLLEQNFGDEHKLESERKDKLAAELGLDPRQVAVWFQNRRARWKN 129 45689************************************************95 PP | |||||||
2 | HD-ZIP_I/II | 112.9 | 2.1e-36 | 75 | 157 | 2 | 84 |
HD-ZIP_I/II 2 kkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekev 84 kkr+l++ qv+lLE++F e+kLe+erK +la eLgl+prqvavWFqnrRAR+k+k+lE++y++Lk+++d++ ++++Le+e XP_026460543.1 75 KKRKLTDLQVTLLEQNFGDEHKLESERKDKLAAELGLDPRQVAVWFQNRRARWKNKKLEEEYSKLKSSHDNVILQKCHLEAEA 157 9******************************************************************************9986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 164 aa Download sequence |
MSSSYTTSDE ILGMDDQNQM LLFSQQFYPD SYNQLIPQEI KLESSETKPK RRRRKNKGGD 60 VLSSEDIKVG NSLMKKRKLT DLQVTLLEQN FGDEHKLESE RKDKLAAELG LDPRQVAVWF 120 QNRRARWKNK KLEEEYSKLK SSHDNVILQK CHLEAEALNR YVSH |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 49 | 56 | PKRRRRKN |
2 | 50 | 55 | KRRRRK |
3 | 50 | 78 | KRRRRKNKGGDVLSSEDIKVGNSLMKKRK |
4 | 51 | 79 | KRRRRKNKGGDVLSSEDIKVGNSLMKKRK |
5 | 52 | 80 | KRRRRKNKGGDVLSSEDIKVGNSLMKKRK |
6 | 75 | 103 | KRRRRKNKGGDVLSSEDIKVGNSLMKKRK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G36740.1 | 1e-43 | HD-ZIP family protein |