PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026460494.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

bHLH

Protein Properties

Length: 296aa MW: 31673.4 Da PI: 8.8863

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026460494.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	42	1.7e-13	73	120	2	54
HHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 2 rrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 +++h+e+ErrRR+riN +++Lr+llP+ K +Ka+ L ++v+++k+L XP_026460494.1 73 CKSHSEAERRRRERINGHLATLRTLLPNT-----IKTDKASLLAEVVQHVKEL 120 789***********************8.....69*************99 PP

Sequence ? help Back to Top
Protein Sequence Length: 296 aa Download sequence
MIPFPNYYGS VDTWAATNNS NHSVGYNLPR QQFNSSSTTM DMGSHDSNIT NGGIATTSSN 60 SKSMTDQKAL AACKSHSEAE RRRRERINGH LATLRTLLPN TIKTDKASLL AEVVQHVKEL 120 KKIANDITGA NRDGDGCYNN TAEWWPFPQE TDELTLNYYC EASSSTSMDE LLLSSSSLLL 180 IRVSLSCDDR PDLMADLTLA LKSVGAKVVK AEITTVGGRL KSILIIQSGV GGGGGGNGLG 240 DLGTLRRALK AVLDKPSPST SSSVSVGNMG AQGNNSNNSK RPRFSRRFGS SSHGEL

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	80	85	ERRRRE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G68810.1	2e-34	bHLH family protein