PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026460374.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

WRKY

Protein Properties

Length: 563aa MW: 62860.8 Da PI: 5.1883

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026460374.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	95.3	4.1e-30	276	335	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 ++Dg++WrKYGqK kg+++pr+YYrCt a gCpv+k+v+r+ ed +++++tYeg+Hnh+ XP_026460374.1 276 MNDGCQWRKYGQKIAKGNPCPRAYYRCTVApGCPVRKQVQRCLEDMTILITTYEGTHNHP 335 58*************************99**************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 563 aa Download sequence
MEEDWEEENT MQTNLSLKVK ANNQDEGEEL ETLDHQTTRA DDENDNEAIP QTSPNKGEAP 60 STESYDEDKE DNVGQNDIGP LSSDKSQLHQ TNTELSVLKV EMERMQEENK GLRKVIEKTT 120 KDYHDLQMKL SLIQEKNDQS YTKDPQIFLS LNGDHHDYTI DHEEDSSKRP ELMISTRSLD 180 FENRTPTPPL PSRCHDDREA AELGLTLRLQ SRHHQHEMVE EPKEVIEDTT NLALSTQNKL 240 QKSGGEFMGI ANNNMSSPPN RKARVSVRAR CQEATMNDGC QWRKYGQKIA KGNPCPRAYY 300 RCTVAPGCPV RKQVQRCLED MTILITTYEG THNHPLPVGA TAMASTTSAE ANNFMLSSRP 360 YSGIDSAISD SILNSFHVPP ASHWSNLNQI NHYSNTSAIN SMFNQAADRA NNGLMLDLSN 420 NSYHNPPNRS THFTNIPGSS SNSFPQLNYS WMNPNSNSSY HRGHESDNTA GFFNSAQQAV 480 VDAHNNNNNN NRIGQEPNSL AENVSAIASD PKFRVAVAAA ITNMFNKETL RTVQPTSGSS 540 LVLKDGESAN SSSSNKKWVS DSL

Sequence ? help Back to Top

Protein Sequence Length: 563 aa Download sequence

MEEDWEEENT MQTNLSLKVK ANNQDEGEEL ETLDHQTTRA DDENDNEAIP QTSPNKGEAP  60
STESYDEDKE DNVGQNDIGP LSSDKSQLHQ TNTELSVLKV EMERMQEENK GLRKVIEKTT  120
KDYHDLQMKL SLIQEKNDQS YTKDPQIFLS LNGDHHDYTI DHEEDSSKRP ELMISTRSLD  180
FENRTPTPPL PSRCHDDREA AELGLTLRLQ SRHHQHEMVE EPKEVIEDTT NLALSTQNKL  240
QKSGGEFMGI ANNNMSSPPN RKARVSVRAR CQEATMNDGC QWRKYGQKIA KGNPCPRAYY  300
RCTVAPGCPV RKQVQRCLED MTILITTYEG THNHPLPVGA TAMASTTSAE ANNFMLSSRP  360
YSGIDSAISD SILNSFHVPP ASHWSNLNQI NHYSNTSAIN SMFNQAADRA NNGLMLDLSN  420
NSYHNPPNRS THFTNIPGSS SNSFPQLNYS WMNPNSNSSY HRGHESDNTA GFFNSAQQAV  480
VDAHNNNNNN NRIGQEPNSL AENVSAIASD PKFRVAVAAA ITNMFNKETL RTVQPTSGSS  540
LVLKDGESAN SSSSNKKWVS DSL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G68150.1	7e-67	WRKY family protein