PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026460297.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

AP2

Protein Properties

Length: 360aa MW: 40403.4 Da PI: 7.2338

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026460297.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	47	6.3e-15	50	109	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrd.pseng...kr.krfslgkfgtaeeAakaaiaarkkleg 55 s y+GV++++++gr++A+++d s+n k+ ++++lg ++ +e Aa a++ a++k++g XP_026460297.1 50 SIYRGVTRHRWTGRYEAHLWDkNSWNEsqnKKgRQVYLGAYDGEEAAAHAYDLAALKYWG 109 57*****************888866656446***********************98 PP
2	AP2	51.2	3.1e-16	152	203	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV +++ +grW+A+I + g +k+ +lg++ t eeAa a++ a+ +++g XP_026460297.1 152 SKYRGVARHHHNGRWEARIGRvF---G-NKYLYLGTYATQEEAATAYDMAAIEYRG 203 89**99******99966...3.6***********************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 360 aa Download sequence
MAKLSQQIKN NNSTTSNNTS TAVTVTTTAA TKVKRKRKSV PRDSPPQRSS IYRGVTRHRW 60 TGRYEAHLWD KNSWNESQNK KGRQVYLGAY DGEEAAAHAY DLAALKYWGR ETILNFPLAT 120 YEEEIKEMEG QSKEEYIGSL RRRSSGFSRG VSKYRGVARH HHNGRWEARI GRVFGNKYLY 180 LGTYATQEEA ATAYDMAAIE YRGLNAVTNF DLSRYIKWLR PNNNNSSDTN TDTKPVVVHP 240 STQDELMNSS TQQHSPSEVA AVYQPRQNGA SSAKSSSALG LLLQSSKFKE MLERTSSEES 300 TEECPLTPAE SDPPKCSFPD DIQTFFECQD SGSYVEGEDN IFGDLNSSSF SPIFDCELGA

Sequence ? help Back to Top

Protein Sequence Length: 360 aa Download sequence

MAKLSQQIKN NNSTTSNNTS TAVTVTTTAA TKVKRKRKSV PRDSPPQRSS IYRGVTRHRW  60
TGRYEAHLWD KNSWNESQNK KGRQVYLGAY DGEEAAAHAY DLAALKYWGR ETILNFPLAT  120
YEEEIKEMEG QSKEEYIGSL RRRSSGFSRG VSKYRGVARH HHNGRWEARI GRVFGNKYLY  180
LGTYATQEEA ATAYDMAAIE YRGLNAVTNF DLSRYIKWLR PNNNNSSDTN TDTKPVVVHP  240
STQDELMNSS TQQHSPSEVA AVYQPRQNGA SSAKSSSALG LLLQSSKFKE MLERTSSEES  300
TEECPLTPAE SDPPKCSFPD DIQTFFECQD SGSYVEGEDN IFGDLNSSSF SPIFDCELGA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G16060.1	1e-98	AP2 family protein