PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026460023.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family HD-ZIP
Protein Properties Length: 738aa    MW: 81680.3 Da    PI: 4.9114
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026460023.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox611.9e-194399157
                    TT--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHHC CS
        Homeobox  1 rrkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakekk 57
                    +rk  ++ +eq++eLe+ F+++++ps e+r eL+++l L+ +qVk+WFqNrR+++k+
  XP_026460023.1 43 KRKYCRHAPEQVRELEAWFKECPHPSYEQRIELSNSLALEPSQVKFWFQNRRTQMKN 99
                    7899999***********************************************995 PP
2START178.15.2e-562314533206
                     HHHHHHHHHHHHHHC-TT-EEEE.....EXCCTTEEEEEEESSS......SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-S....EEEEEE CS
           START   3 aeeaaqelvkkalaeepgWvkss.....esengdevlqkfeeskv.....dsgealrasgvvdmvlallveellddkeqWdetla....kaetle 83 
                     a  a+qelv++a+ +ep+W  s      e +n+de+++ f+++ v       +ea r++gvv+ ++++ +e+l+d k ++  +++    ++ +++
  XP_026460023.1 231 AVLATQELVLMAQTNEPLWIPSGldggrETLNEDEYMRMFTPACVgpkpgVVTEATRETGVVIINTVEFLETLMDAK-RYMDMFPsviaRCNIIN 324
                     66689*****************99******************999**99999*************************.77777777777****** PP

                     EECTT......EEEEEEEEXXTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--.-TTSEE-EESSEEEEEEEECTCEEEEEEEE-EE CS
           START  84 vissg......galqlmvaelqalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppesssvvRaellpSgiliepksnghskvtwvehvd 171
                     vis g      galqlm+ae+ +ls+lvp R++ f+Ry++q+ +g+w +vd+Svd++q+ + +ss+  +++lpSg++++p++ng+skvtwveh++
  XP_026460023.1 325 VISRGaggtrnGALQLMYAEFRVLSTLVPvREVNFLRYCKQHAEGVWSVVDISVDVDQETS-DSSIYSSRRLPSGCVVQPMPNGYSKVTWVEHTE 418
                     ***********************************************************99.9******************************** PP

                     --SSXXHHHHHHHHHHHHHHHHHHHHHHTXXXXXX CS
           START 172 lkgrlphwllrslvksglaegaktwvatlqrqcek 206
                     ++++++h+l+++l++sgl +ga +w atlqrqce+
  XP_026460023.1 419 YREKTIHQLYEPLINSGLGFGAPKWIATLQRQCEC 453
                     *********************************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 738 aa     Download sequence    
MDGYGRRDNL RENLDECESG SGSDDLDGAN SDEQVTRKQS PKKRKYCRHA PEQVRELEAW  60
FKECPHPSYE QRIELSNSLA LEPSQVKFWF QNRRTQMKNQ IERNETLMLR KENDQLRAEN  120
IEISEAIRNL ICKNCRGKAM LGEVSLAEGN LRIENARLKE ELNRVSAIAG KSFGGMNQDV  180
NGINPNLLMG DNDHQFPEGG ISGGMPSMPV LPHQQQLMSN VDRSDENLEL AVLATQELVL  240
MAQTNEPLWI PSGLDGGRET LNEDEYMRMF TPACVGPKPG VVTEATRETG VVIINTVEFL  300
ETLMDAKRYM DMFPSVIARC NIINVISRGA GGTRNGALQL MYAEFRVLST LVPVREVNFL  360
RYCKQHAEGV WSVVDISVDV DQETSDSSIY SSRRLPSGCV VQPMPNGYSK VTWVEHTEYR  420
EKTIHQLYEP LINSGLGFGA PKWIATLQRQ CECNMPIRDR PDITQTGMKN MLKLAQRMTQ  480
SFSDGVRPSS MHPWNIYIST ANVDANVRLM TRTSINDPGI PAGIVMNAAT SVWLPISQEK  540
LFDYLRNENL RSQWDVLSTG GSVLQVSHIK GQDPGNCISL LHAGAVNGNH GSTFIFQETC  600
TDASGSLVVY AAVDLLPMND LLMGGGDSDY IQLLPCGFSI VPDGDSCPSS LSNRACADRP  660
NSSNSYGNYG SCGSTMRQLT SDDSLGRCGS LLTASFQILV SSSSTGEPTL ECVESLCSLI  720
TNTLEKLKAA VQMLDVNY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G00730.10.0HD-ZIP family protein