PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_026459946.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
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Family | MYB | ||||||||
Protein Properties | Length: 315aa MW: 36421.2 Da PI: 8.7573 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 50.3 | 5.4e-16 | 39 | 84 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg W + Ed +l+++v+++G+ +W++Ia ++ gR++k+c++rw++ XP_026459946.1 39 RGHWRPAEDSKLKELVALYGPQNWNLIAGKLE-GRSGKSCRLRWFNQ 84 899*****************************.***********996 PP | |||||||
2 | Myb_DNA-binding | 53.3 | 6.5e-17 | 91 | 134 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 r+ +++eE+++l da++++G++ W+ Iar + gRt++++k++w+ XP_026459946.1 91 RKGFSEEEEQRLMDAHRLYGNK-WAMIARLFH-GRTDNSVKNHWHV 134 5669******************.*********.***********96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 315 aa Download sequence |
MECNNQNSRD LDAESHNYHH HHRYSVMSNN NGQSKLCLRG HWRPAEDSKL KELVALYGPQ 60 NWNLIAGKLE GRSGKSCRLR WFNQLDPRIT RKGFSEEEEQ RLMDAHRLYG NKWAMIARLF 120 HGRTDNSVKN HWHVIMARKY RERSSSSYRR RKSIPFFHES GGSYLGSPMN NNRFCEDHPH 180 SPPPPPPPPS RDFFSAPGQN QDMGSSFNHH ISRCTWEVQP RNDYCSNFMI PPTSTYYHDS 240 MHHHDLLQQE LQQYQQTTYS HSSSKTSTSH VSVSDHFQAS SSSSVDNNNN RVIATTYVDT 300 TITPPFIDFL GVGAT |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G69560.1 | 6e-62 | MYB family protein |