PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_026459485.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
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Family | MYB | ||||||||
Protein Properties | Length: 165aa MW: 18874.3 Da PI: 10.1235 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 25 | 4.4e-08 | 6 | 52 | 3 | 47 |
SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrwqky 47 rWT e d+l+ + + g ++++Ia++++ g++ ++ ++q + XP_026459485.1 6 RWTREQDKLFETGLVIYTEGtpdRFSRIAERVP-GKSVSEVHQHYQLL 52 8********************************.***********965 PP | |||||||
2 | Myb_DNA-binding | 32.6 | 1.8e-10 | 98 | 142 | 3 | 47 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +WT++E+ ++ + ++ G g+W+ I+r + k Rt+ q+ s+ qky XP_026459485.1 98 PWTAQEHRDFLLGLTERGRGDWRGISRDFVKSRTPGQVASHAQKY 142 7*******************************************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 165 aa Download sequence |
MEGAARWTRE QDKLFETGLV IYTEGTPDRF SRIAERVPGK SVSEVHQHYQ LLVRDMLEIE 60 AGHVELPNYL DDFVLSSTNQ SGTTTSTSKA KERKIGIPWT AQEHRDFLLG LTERGRGDWR 120 GISRDFVKSR TPGQVASHAQ KYFIHINTKP NKKVRKRSSI HDTPL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G04760.1 | 8e-48 | MYB family protein |