PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026459049.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family FAR1
Protein Properties Length: 295aa    MW: 34358.7 Da    PI: 6.599
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026459049.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR171.22.4e-2241123389
            FAR1   3 YneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHel 89 
                     +++YAk++GF vrk++++k+ ++g i + t+vC++ g++ + +k+     ++r+ +r++Cka ++ ++++++kwe+t+l+l+HnH+ 
  XP_026459049.1  41 FKAYAKRLGFAVRKRTNRKN-EEGIIRSVTYVCNRAGNPVNMTKN---IVKPRKRNRCDCKAYVTARLDDEDKWEITQLKLDHNHTY 123
                     89**************9998.8888***************99988...999**********************************85 PP
Sequence ? help Back to Top
Protein Sequence    Length: 295 aa     Download sequence    
MVAASLDDAE KETGEKMQST DEEEFYIGKK FETHDDLFSA FKAYAKRLGF AVRKRTNRKN  60
EEGIIRSVTY VCNRAGNPVN MTKNIVKPRK RNRCDCKAYV TARLDDEDKW EITQLKLDHN  120
HTYNPSLARH YQQHRKVEPH VLHTIDLNDQ LGIPVEKTFR SVVNQFGGFD KVDCNEKDCR  180
NALDVIRRLR LSEGDATALM KYFSKKVKEN SGFYFEVDYS EDNCLKNVFW ADGWSREEYK  240
EFGEVISFDA TYMTNDYEMP FTPFIGVNHH GQSILLGCGL LCDETTETFV WIFKK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.17e-51FAR1 family protein