PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_026458142.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
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Family | HB-PHD | ||||||||
Protein Properties | Length: 740aa MW: 84412.1 Da PI: 9.8772 | ||||||||
Description | HB-PHD family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 31 | 4.3e-10 | 513 | 559 | 7 | 53 |
--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHH CS Homeobox 7 ftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRa 53 + ++ +e+L ++F+++ p ++ +e L+k+lg+ ++++ WF+N R+ XP_026458142.1 513 IPPDAVEVLRKVFAETELPPKDVKENLSKQLGIASEKISKWFKNTRY 559 457899***************************************97 PP | |||||||
2 | PHD | 32.8 | 1.6e-11 | 227 | 282 | 1 | 51 |
SBTTTSS..TCTTSSEEEBS.SSSSEEETTTSTSSSSHHSHHSS..TBSSHHHHTT CS PHD 1 rCkvCgk..sdeegelvlCd.gCkewfHlkClglkleseekpeg..ewlCeeCkek 51 +C+ C+ + +++++lCd +C+ +fH+kCl+++l ++++p + w+C+ C++k XP_026458142.1 227 ICAKCKLreAFPDNDIILCDgTCDCAFHQKCLDPPLATQNIPPDdqGWFCKFCECK 282 588898854455********56*******************99999*******985 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 740 aa Download sequence |
MESTRRKVRR QVSGKTRRDV ASKMAISADD GGTRYYDKVY NPNKRSQART ICSILSKKKR 60 RGSEISNNGS RKKPQIRRKV MQKFSDTDSS DKPLSSIFRR RKSSTSRRDT DGNLGNQKNA 120 RRRKRNRMKE NREQDETVRL QRRTKYLIIK MKLEQNLIDA YSGEGWNGQS REKIKPEREL 180 QRAKKQILKC KLGIRDAIHQ LHLLGSKGCI EQSALAPDGS VFHEHIICAK CKLREAFPDN 240 DIILCDGTCD CAFHQKCLDP PLATQNIPPD DQGWFCKFCE CKMEIIEAVN AHLGTHFSTS 300 SNWQDVFEEA AVEPDENASL NPEDEWPSDE SDDDDYDPER NEMSCSINGM GTKDDKADEA 360 SSSSSFLWTS DEEANLQSRS LLENDGSPEG GFYQSKHRGK NSDKINLSKM IDNKNSDGST 420 DLEIRSRRRQ RRDVDYRKLH DEMFGKDLVE NEQVSEDEDW GPCRQRRRLN GSDIAGTLVS 480 LFGDEDKHSD GNPTKPKKKL RRVPDEKRTL FRIPPDAVEV LRKVFAETEL PPKDVKENLS 540 KQLGIASEKI SKWFKNTRYM ALKIRKEANE SNAAAGSNRT TDLAASKAKA SLLSSDNEEA 600 KLTKFSGNGR RRKNMESLTI SPAKKRRRSR TAGARPTSIN EVNTLLNSPP RFKKKSTINL 660 KREQVVEDNI IPKYEQLNST KIELLYSAEM ERLCSLQAKL EEMKKVLIGI QEGKSTATKE 720 TNHAEQLVVY VPVAEVRVKR |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 57 | 61 | KKKRR |
2 | 57 | 83 | KKKRRGSEISNNGSRKKPQIRRKVMQK |
3 | 58 | 84 | KKKRRGSEISNNGSRKKPQIRRKVMQK |
4 | 122 | 152 | RRKRNRMKENREQDETVRLQRRTKYLIIKMK |
5 | 495 | 501 | KPKKKLR |
6 | 610 | 628 | RRRKNMESLTISPAKKRRR |
7 | 611 | 629 | RRRKNMESLTISPAKKRRR |
8 | 625 | 655 | RRKRNRMKENREQDETVRLQRRTKYLIIKMK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G29940.2 | 1e-129 | HB-PHD family protein |