PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026457322.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

bHLH

Protein Properties

Length: 739aa MW: 78972.8 Da PI: 6.8003

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026457322.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	50.6	3.4e-16	487	533	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 hn ErrRRdriN+++ L+el+P++ K++Ka++L +A+eY+k Lq XP_026457322.1 487 VHNLSERRRRDRINEKMRALQELIPNC-----NKVDKASMLDEAIEYLKTLQ 533 6***********************8.....6****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 739 aa Download sequence
MPNSSSHLHH HRFSNKLDSS STATTQPTRM TYSSAAATDL DFPPENEFVE LVCENGQIMM 60 HGQSGSRNRK NLSVGGFSSP SSKKDAAGGG GDVVNSKIGS KFGNMDAAAA NDFSAATGGP 120 SSAHHHIGGL NQDDDIGPWL SYPLEDSMQH DYGSDFFSEL TGVNLNSLSS SHQTHTAQSQ 180 NFGVVPFEIK NTSARYSQMI TDSNLSTDTT TATRPRSSSI NQLECHNSNS SPRPRASDFS 240 SGDVNQASYR YSKQTPEAAG KVLIPKMQKQ DQVPITSTPL GLMNFSYFSR PAALVKANLQ 300 GISVAPSAGL SSADRTGSKV KMSGFSSNPV ESPLIDLTTS SKGVGGFQNP PVQIVSKVDI 360 DPSTSNPAKE LSSAEQSGAI SREDASRSTE LTDKILRQTS SFAASTNTER PDTDKSVEPP 420 VASSSMCSGN SAGGTSNDYK HSSKRKSREV DESEYQSEDV EEESAGARKQ SNARGGSGAK 480 RTRAAEVHNL SERRRRDRIN EKMRALQELI PNCNKVDKAS MLDEAIEYLK TLQLQVQIMS 540 MGTGMYMPPM MLPTGMQRMP GQHMPHFPHM GVGMGMGMGM GFGMGILDMG SASSMMQVPP 600 MHNMQFPCPP LPGHNNFPTM PGSNLQMFGH PGRGIPMPMP HPSYAPPSEG PYAKSVPVPD 660 VPRTATPAEI PGPASTSSSK DINLQVIQNA NVESQQNPKS QQDQEAGDGF KLSTLAQRSD 720 QSPPVVATEK STLPTGMGP

Sequence ? help Back to Top

Protein Sequence Length: 739 aa Download sequence

MPNSSSHLHH HRFSNKLDSS STATTQPTRM TYSSAAATDL DFPPENEFVE LVCENGQIMM  60
HGQSGSRNRK NLSVGGFSSP SSKKDAAGGG GDVVNSKIGS KFGNMDAAAA NDFSAATGGP  120
SSAHHHIGGL NQDDDIGPWL SYPLEDSMQH DYGSDFFSEL TGVNLNSLSS SHQTHTAQSQ  180
NFGVVPFEIK NTSARYSQMI TDSNLSTDTT TATRPRSSSI NQLECHNSNS SPRPRASDFS  240
SGDVNQASYR YSKQTPEAAG KVLIPKMQKQ DQVPITSTPL GLMNFSYFSR PAALVKANLQ  300
GISVAPSAGL SSADRTGSKV KMSGFSSNPV ESPLIDLTTS SKGVGGFQNP PVQIVSKVDI  360
DPSTSNPAKE LSSAEQSGAI SREDASRSTE LTDKILRQTS SFAASTNTER PDTDKSVEPP  420
VASSSMCSGN SAGGTSNDYK HSSKRKSREV DESEYQSEDV EEESAGARKQ SNARGGSGAK  480
RTRAAEVHNL SERRRRDRIN EKMRALQELI PNCNKVDKAS MLDEAIEYLK TLQLQVQIMS  540
MGTGMYMPPM MLPTGMQRMP GQHMPHFPHM GVGMGMGMGM GFGMGILDMG SASSMMQVPP  600
MHNMQFPCPP LPGHNNFPTM PGSNLQMFGH PGRGIPMPMP HPSYAPPSEG PYAKSVPVPD  660
VPRTATPAEI PGPASTSSSK DINLQVIQNA NVESQQNPKS QQDQEAGDGF KLSTLAQRSD  720
QSPPVVATEK STLPTGMGP

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	492	497	ERRRRD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G09530.2	6e-44	bHLH family protein