PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026457310.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

WRKY

Protein Properties

Length: 582aa MW: 63673.7 Da PI: 7.1541

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026457310.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	97.1	1.2e-30	301	359	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 +Dg++WrKYGqK+ kg+++pr+YYrCt+a gCpv+k+v+r++ed++v+++tYeg+Hnh+ XP_026457310.1 301 SDGCQWRKYGQKMAKGNPCPRAYYRCTMAvGCPVRKQVQRCSEDKTVLITTYEGNHNHP 359 7*********************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 582 aa Download sequence
MGTHERDDLK EITTTTPEMS NPGGGEFRTP PTNGGDDHNH SSNKHTANKN PSLSVADTSS 60 NKMKNFFSSD EHQKHREVGG RERVSVDLYN PKQHQDHMKI ELAKTEPTTT NISSTGLVNT 120 SGGMLIGSKF EEDKLVVQEE KPKIQINCDQ RYNTTSNSAS RKTLSVRQFM DPNPSKGAIL 180 NLDMNEPSHS EAAATDDDHE MTTQQPSTSV TNYIEAEESV SKEYHLFSED VAANSRKRPT 240 MKEETEDIND QVYRSNLKNQ KSAQSKSSGS SVEEEVPPAA VAACRKARVS VRAQSEAPLI 300 SDGCQWRKYG QKMAKGNPCP RAYYRCTMAV GCPVRKQVQR CSEDKTVLIT TYEGNHNHPL 360 PPQATAMAHT TTAAANMLLS GSTMSNNREP TLSASLFSSP SAAPIFPYNA NIATLSASAP 420 FPTITLDLTT TPNVHHQHHH QTPPPADPRQ FQRQPLFPLP LQAYPPHSQS LLRPPYLVNP 480 PNPLRVASAI PSAQLATQQQ QGMVEMVTAA ITSDPNFTTA LAAAISSIMG APMRNTHELN 540 NSNNNNSNNK NNSSASEVTT VQPALPNHMH PHTSCPNTFN PM

Sequence ? help Back to Top

Protein Sequence Length: 582 aa Download sequence

MGTHERDDLK EITTTTPEMS NPGGGEFRTP PTNGGDDHNH SSNKHTANKN PSLSVADTSS  60
NKMKNFFSSD EHQKHREVGG RERVSVDLYN PKQHQDHMKI ELAKTEPTTT NISSTGLVNT  120
SGGMLIGSKF EEDKLVVQEE KPKIQINCDQ RYNTTSNSAS RKTLSVRQFM DPNPSKGAIL  180
NLDMNEPSHS EAAATDDDHE MTTQQPSTSV TNYIEAEESV SKEYHLFSED VAANSRKRPT  240
MKEETEDIND QVYRSNLKNQ KSAQSKSSGS SVEEEVPPAA VAACRKARVS VRAQSEAPLI  300
SDGCQWRKYG QKMAKGNPCP RAYYRCTMAV GCPVRKQVQR CSEDKTVLIT TYEGNHNHPL  360
PPQATAMAHT TTAAANMLLS GSTMSNNREP TLSASLFSSP SAAPIFPYNA NIATLSASAP  420
FPTITLDLTT TPNVHHQHHH QTPPPADPRQ FQRQPLFPLP LQAYPPHSQS LLRPPYLVNP  480
PNPLRVASAI PSAQLATQQQ QGMVEMVTAA ITSDPNFTTA LAAAISSIMG APMRNTHELN  540
NSNNNNSNNK NNSSASEVTT VQPALPNHMH PHTSCPNTFN PM

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G04450.1	9e-64	WRKY family protein