PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026456910.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family GATA
Protein Properties Length: 337aa    MW: 37656.6 Da    PI: 6.87
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026456910.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA572.7e-18255289135
            GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 
                     Cs+Cg+ kTp+WR gp g ktLCnaCG+++++ +l
  XP_026456910.1 255 CSHCGVQKTPQWRTGPMGAKTLCNACGVRFKSGRL 289
                     *******************************9986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 337 aa     Download sequence    
MECVFQANAM KKSFYQPGFV AEEFLGSNNG NTNCGFGDDT SFVDEFLNFS KEEEQDDEEF  60
VEEKDCVSVS SQENSTEVSF KDAFDSLGSS ELCVPTDDLA DLEWVSHFVD DSFNQEFSFS  120
CPKATTTTTN QELKTQTPKE SNSSYSSVPI SGISSLKTFS VPPKRSRTKR ARTTNGRRIW  180
SLGSPPSFSE SSSTTTSSSS TSSSSPTSTL MFTKPQTLDF LYYQPEKKKQ KPKSKSYENQ  240
NPQLQQQQQQ YQRRCSHCGV QKTPQWRTGP MGAKTLCNAC GVRFKSGRLL PEYRPACSPT  300
FSSDVHSNNH RKVLEMRKKK EIITGSDSGM VPAVQSF
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1165170RSRTKR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G66320.26e-54GATA family protein