PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026456888.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

NAC

Protein Properties

Length: 373aa MW: 42945.1 Da PI: 6.5863

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026456888.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	173.5	6.1e-54	5	134	1	129
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk...kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkev 92 +ppGfrFhPtdeelv +yLkkkv+++k++l +vi+++d+y++ePwdL++ ++e+kewyfFs++dkky+tg+r+nrat +g+Wkatg+dk+v XP_026456888.1 5 VPPGFRFHPTDEELVGYYLKKKVASQKIDL-DVIRDIDLYRIEPWDLQErcrIGYEEQKEWYFFSHKDKKYPTGTRTNRATMAGFWKATGRDKAV 98 69**************************.9***********953432234677******************************** PP NAM 93 lskkgelvglkktLvfykgrapkgektdWvmheyrle 129 ++ k +l+g++ktLvfykgrap+g+k+dW++heyrle XP_026456888.1 99 YD-KIKLIGMRKTLVFYKGRAPNGQKSDWIIHEYRLE 134 .999*****************************85 PP

Sequence ? help Back to Top
Protein Sequence Length: 373 aa Download sequence
MESLVPPGFR FHPTDEELVG YYLKKKVASQ KIDLDVIRDI DLYRIEPWDL QERCRIGYEE 60 QKEWYFFSHK DKKYPTGTRT NRATMAGFWK ATGRDKAVYD KIKLIGMRKT LVFYKGRAPN 120 GQKSDWIIHE YRLESDENGA PQEEGWVVCR AFKKRTTTNC QTRNHTDRRW ESSSRPYDHE 180 SSGFSSILDS VGCITKQQNF ICKQEIHEVV NLNLDSNFLE LIPQLESPSM PLVKKHPLTS 240 LLSSRCPTEP VAIIVIDEDH EEDTTRIRGY TSDDKNNNKM KHGSTEQKVT DWRALDKFVA 300 SQLSHGDNKN RSHDSETRPN LGVALGDDQY NSDIALLLSR EENNEINKLK EFLLSSSASA 360 SGDDCDNRIG ICI

Sequence ? help Back to Top

Protein Sequence Length: 373 aa Download sequence

MESLVPPGFR FHPTDEELVG YYLKKKVASQ KIDLDVIRDI DLYRIEPWDL QERCRIGYEE  60
QKEWYFFSHK DKKYPTGTRT NRATMAGFWK ATGRDKAVYD KIKLIGMRKT LVFYKGRAPN  120
GQKSDWIIHE YRLESDENGA PQEEGWVVCR AFKKRTTTNC QTRNHTDRRW ESSSRPYDHE  180
SSGFSSILDS VGCITKQQNF ICKQEIHEVV NLNLDSNFLE LIPQLESPSM PLVKKHPLTS  240
LLSSRCPTEP VAIIVIDEDH EEDTTRIRGY TSDDKNNNKM KHGSTEQKVT DWRALDKFVA  300
SQLSHGDNKN RSHDSETRPN LGVALGDDQY NSDIALLLSR EENNEINKLK EFLLSSSASA  360
SGDDCDNRIG ICI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G18060.1	1e-130	NAC family protein