PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026456818.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

AP2

Protein Properties

Length: 576aa MW: 64273 Da PI: 6.6092

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026456818.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	45.9	1.4e-14	278	337	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrd.pse.ng..kr.krfslgkfgtaeeAakaaiaarkkleg 55 s y+GV++++++gr++A+++d + g ++ ++++lg ++ +++Aa+a++ a++k++g XP_026456818.1 278 SIYRGVTRHRWTGRYEAHLWDnSCRrEGqsRKgRQVYLGGYDKEDKAARAYDLAALKYWG 337 57*****************666664477446******99***********98 PP
2	AP2	35.8	2e-11	382	428	3	55
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 y+GV++++++grW A+I + +k +lg t+eeAa+a++ a+ k++g XP_026456818.1 382 YRGVTRHHQQGRWQARIGRVAG---NKDLYLG---TEEEAAEAYDIAAIKFRG 428 9*************988532...577...99***********998 PP

Sequence ? help Back to Top
Protein Sequence Length: 576 aa Download sequence
MTPTNWLSFS LSPLDLYQST NTTHHHQDAA PTTTATTPKY MPYESLSSDS SHQYYNFDSL 60 YANNNNDYWT NSMRAATNQD SHGYTAVEEI QDIKEIKTGD FSFLTSLNHQ QIVPKLEDFL 120 GGDSVSASSM HHQQHSQTET QEDSALSNVY HEQQSTCYYG GDQQDLKAIT GFHQGTFSSA 180 NSGSEVDDSS VSVTGSMGFH PHHHQQALSL ESSRNDLLYS DTTTPTTNNN NNNSNQRLSL 240 AVSSNKTQNS EKAIVAVGDA NSESCKKITP DTFGQRTSIY RGVTRHRWTG RYEAHLWDNS 300 CRREGQSRKG RQVYLGGYDK EDKAARAYDL AALKYWGPTA TTNFPVTNYS KEMEDMKTMT 360 KQEFIASLRR KSSGFSRGAS MYRGVTRHHQ QGRWQARIGR VAGNKDLYLG TEEEAAEAYD 420 IAAIKFRGLN AVTNFEMNRY NVEAITNNEL PIGGAAKRLK LSLEAESETQ SPQVHREQPP 480 TGSCCSSIST VPGVYQDSAT TLYHQHLFHQ LSYTNGTSSH PVIAPIMSSP SEFYGRGMIY 540 GSTTPFNISS HFNNSINNTE ANLNQPWNMT ASYNNN

Sequence ? help Back to Top

Protein Sequence Length: 576 aa Download sequence

MTPTNWLSFS LSPLDLYQST NTTHHHQDAA PTTTATTPKY MPYESLSSDS SHQYYNFDSL  60
YANNNNDYWT NSMRAATNQD SHGYTAVEEI QDIKEIKTGD FSFLTSLNHQ QIVPKLEDFL  120
GGDSVSASSM HHQQHSQTET QEDSALSNVY HEQQSTCYYG GDQQDLKAIT GFHQGTFSSA  180
NSGSEVDDSS VSVTGSMGFH PHHHQQALSL ESSRNDLLYS DTTTPTTNNN NNNSNQRLSL  240
AVSSNKTQNS EKAIVAVGDA NSESCKKITP DTFGQRTSIY RGVTRHRWTG RYEAHLWDNS  300
CRREGQSRKG RQVYLGGYDK EDKAARAYDL AALKYWGPTA TTNFPVTNYS KEMEDMKTMT  360
KQEFIASLRR KSSGFSRGAS MYRGVTRHHQ QGRWQARIGR VAGNKDLYLG TEEEAAEAYD  420
IAAIKFRGLN AVTNFEMNRY NVEAITNNEL PIGGAAKRLK LSLEAESETQ SPQVHREQPP  480
TGSCCSSIST VPGVYQDSAT TLYHQHLFHQ LSYTNGTSSH PVIAPIMSSP SEFYGRGMIY  540
GSTTPFNISS HFNNSINNTE ANLNQPWNMT ASYNNN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G10510.1	1e-124	AP2 family protein