PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_026456816.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
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Family | AP2 | ||||||||
Protein Properties | Length: 579aa MW: 64578.4 Da PI: 6.6092 | ||||||||
Description | AP2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 45.9 | 1.4e-14 | 278 | 337 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrd.pse.ng..kr.krfslgkfgtaeeAakaaiaarkkleg 55 s y+GV++++++gr++A+++d + g ++ ++++lg ++ +++Aa+a++ a++k++g XP_026456816.1 278 SIYRGVTRHRWTGRYEAHLWDnSCRrEGqsRKgRQVYLGGYDKEDKAARAYDLAALKYWG 337 57*******************666664477446**********99*************98 PP | |||||||
2 | AP2 | 52.4 | 1.3e-16 | 382 | 431 | 3 | 55 |
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 y+GV++++++grW A+I + +k +lg+fgt+eeAa+a++ a+ k++g XP_026456816.1 382 YRGVTRHHQQGRWQARIGRVAG---NKDLYLGTFGTEEEAAEAYDIAAIKFRG 431 9***************988532...5************************998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 579 aa Download sequence |
MTPTNWLSFS LSPLDLYQST NTTHHHQDAA PTTTATTPKY MPYESLSSDS SHQYYNFDSL 60 YANNNNDYWT NSMRAATNQD SHGYTAVEEI QDIKEIKTGD FSFLTSLNHQ QIVPKLEDFL 120 GGDSVSASSM HHQQHSQTET QEDSALSNVY HEQQSTCYYG GDQQDLKAIT GFHQGTFSSA 180 NSGSEVDDSS VSVTGSMGFH PHHHQQALSL ESSRNDLLYS DTTTPTTNNN NNNSNQRLSL 240 AVSSNKTQNS EKAIVAVGDA NSESCKKITP DTFGQRTSIY RGVTRHRWTG RYEAHLWDNS 300 CRREGQSRKG RQVYLGGYDK EDKAARAYDL AALKYWGPTA TTNFPVTNYS KEMEDMKTMT 360 KQEFIASLRR KSSGFSRGAS MYRGVTRHHQ QGRWQARIGR VAGNKDLYLG TFGTEEEAAE 420 AYDIAAIKFR GLNAVTNFEM NRYNVEAITN NELPIGGAAK RLKLSLEAES ETQSPQVHRE 480 QPPTGSCCSS ISTVPGVYQD SATTLYHQHL FHQLSYTNGT SSHPVIAPIM SSPSEFYGRG 540 MIYGSTTPFN ISSHFNNSIN NTEANLNQPW NMTASYNNN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G10510.1 | 1e-127 | AP2 family protein |