PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026456810.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family GATA
Protein Properties Length: 334aa    MW: 36761.6 Da    PI: 4.9284
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026456810.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA51.11.9e-16242278135
            GATA   1 CsnCgttk..TplWRrgpdgnktLCnaCGlyyrkkgl 35 
                     C++Cgt++  Tp++Rrgp+g+ +LCnaCGl+++ kg+
  XP_026456810.1 242 CTHCGTSSnsTPMMRRGPQGPGSLCNACGLKWANKGT 278
                     **********************************997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 334 aa     Download sequence    
MSRNQNRQDI NQSYGHNAVM SNNMIADFHI IDEDFAEEEE DDEAIDKPNN NNLYEQEQDD  60
DNNGLMDGVE EDVPSSYGAA YADVSEVENR RNNSNVVAVR EFNNMNQLAL SFQGKLRTFD  120
SVTPEKVHAV MLLLGGTEVP GAIDATSSFG LTTAPLSDQT QKGDFPQRAS QGQRALALNK  180
YREKRKDHCF DKKIRYAVRK EVAQRMQRKK GQFASSKPTP MESVFWSPSD APVPVEQLET  240
ICTHCGTSSN STPMMRRGPQ GPGSLCNACG LKWANKGTLT DLPRTVAATM KKSVNQGTEM  300
DGANGGKVDG DGGEMRFTSQ APDTVPSRHG NNET
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G21175.25e-59GATA family protein