PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_026456720.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
|
||||||||
Family | MYB_related | ||||||||
Protein Properties | Length: 1176aa MW: 131609 Da PI: 9.5225 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 25.7 | 2.6e-08 | 47 | 82 | 3 | 40 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqc 40 W++eE +++++a +++ ++ Wk++a + +R+ +++ XP_026456720.1 47 QWSKEELKRFYEAYRKYEKD-WKKVAGVVR-NRSTEMV 82 6*****************99.*********.**99877 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 1176 aa Download sequence |
MATRKSRSIN NKRFGKLNEE SPDKDGGSGG NKSRQRKRKL TDMLGPQWSK EELKRFYEAY 60 RKYEKDWKKV AGVVRNRSTE MVEALYHMNR AYLSLPEGTA SVAGLIAMMT DHYCILDGSE 120 SDRESDDAPG VSQKLAKRAR GKYHVNGSRG TDADVPDLLK FPPLSSNNGC FSVKKKRTNG 180 GRRAVGKRTP RYPVSHEREK FVTPNKRGLK SDLDAHDEEV AHGAALTLAE ALQRGGSPQV 240 SHTPKRRSEH LRPSSSRKSE RRRQLDWDKS STKHRGITDE NYLEDSLGSR EAENGDFYRN 300 SSYMMDARGV GTVGVQKKGK KSLGRKPKDI ENCHRDEDRE ACSGTEEGLN LSYVKEQAED 360 EVTDSRYVRP RKKNKELKED EKQALDGLTF LANMSLELEP AAVDESESSV QFKEERGRGS 420 RGNVDNFSRH ETFSTIRQRD KSNFSGVKEK SLREVEVTTL RSARSIKGSS FDVNSLTEEK 480 KPPSQTTIKG QKLKRKHFAA KMQSPTNESH SDLLPDERQQ IEALEENVKK STMKAKRVAA 540 AAVISKQGKS FRPPELTSSS TDLVRPGTDA ALSTEQVPTP NQVFLPTKHE SRRKMNLQKS 600 LIRRVSNFSE DMGSKQPGKH TSQDGTLDIK EKLSRCLSSP MLRRWCAFEW FYSAIDYPWF 660 AKKEFVEYLN HVGLGHVPRL TRVEWGVIRS SLGKPRRLSQ QFLREEKEKL EQYRESVRTH 720 YTELRNGTRD GLPTDLARPL SVGQRVIACH PRTREFHDGS VLTVDRNRCR IQFDRPELGV 780 EFVMDIDCMP LNAFENMPEA LRRQNIAAGR LSENLSDPKL NNQSKDRTTG GYKSIAPSAK 840 LETADVSSQL TSPIYPMNTL IKKAEGDTIS DIAEAKAAAN ELKAAYIQPC TLAQIQAREA 900 DIRALSELSR ALEKKEALVS ELSRMNDEVQ ENQINGDNSL KDHDPFKKQY ATVSSALIYL 960 RKRNTYQGNS PPWQTSKPGS GVPVGPFNSI DASAFLPQEA ASHVVGILES SRVKAQTMVD 1020 VAVQALLSCK DGEDAFGSIG DALDSASTHQ NGTEVRSFTS TDLINGGSFH YQDAATNSHI 1080 SKPVMAVYSN GTKQNNSTFD ANEVQIPKDL ISSCLATLLM VQTCTERQYP PAEVAQILDS 1140 AFTSLHPCCS QNLPIYQEIR LCMGLVKNQI LALIPT |
Nucleic Localization Signal ? help Back to Top | |||
---|---|---|---|
No. | Start | End | Sequence |
1 | 480 | 496 | KKPPSQTTIKGQKLKRK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT3G21430.2 | 0.0 | MYB_related family protein |