PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026456516.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

bHLH

Protein Properties

Length: 712aa MW: 79383.5 Da PI: 4.9099

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026456516.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	43.4	6.1e-14	512	558	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h +ErrRR+++N++f Lr+l+P +K++Ka+iL ++eY+k+L+ XP_026456516.1 512 NHVLAERRRREKLNERFIVLRSLVPFV-----TKMDKASILGDTIEYVKQLK 558 7999********************8.....8***************95 PP

Sequence ? help Back to Top
Protein Sequence Length: 712 aa Download sequence
MAVAHQPPNS RLQTMLQSAV QAVQWTYSLF WQVCPQQGIL VWGDGYYNGA IKTRKTVQPV 60 EVSTEEASLQ RSQQLRELYE SLSAEETNQP TRRPCAALSP EDLTESEWFY LMSVSFSFPP 120 GVGLPGKAYT RQQHIWLTGA NETESKIFSR AILAKSAHIQ TVLCIPLLDG IIEFGTTDRV 180 QEDLGLIQYV KGFFTDYRHQ PTPARSEHST SNPASTSSEQ FNFNSTPGLL SAMYSAAHPI 240 PHSSNLEKQN EEDEDDEEEE EEEDDDDEEN GSESDSQAET GRNSYADAAA TTVVMQDPIH 300 LCDPMIEGLV TTTAERSELV QHEMSEDIRI GSPDDVSNNN LDPDVRMFDI THGSEPGRKW 360 SADQLISGGG LQIPNSDTPQ NEELTREDSH YSQTVSTILQ QNSNQWPDYT TTAPPLGGGY 420 IGYTLSSSSS SSTTSQSAFA KWSNQNNHLL HLPPPLDVTS SPPQWRLKYI LFHVPYLHNK 480 SRDESCTRSR DGSEQGHNKL RKGSSAEDLS ANHVLAERRR REKLNERFIV LRSLVPFVTK 540 MDKASILGDT IEYVKQLKKK IQELELKNQS DIDQRMKNMV GFNVTSGGGS NQMVNDPIGF 600 PGSEKRKLRI VEGNAGAKAK VLEGPLVIGN IVQVSIIESD ALLELRCLYK EGILLEIMQT 660 LRDLRLEITA VQSSSSNGIF VAELRAKVKE NYIGKKPTIM EVKKAIHQVL SH

Sequence ? help Back to Top

Protein Sequence Length: 712 aa Download sequence

MAVAHQPPNS RLQTMLQSAV QAVQWTYSLF WQVCPQQGIL VWGDGYYNGA IKTRKTVQPV  60
EVSTEEASLQ RSQQLRELYE SLSAEETNQP TRRPCAALSP EDLTESEWFY LMSVSFSFPP  120
GVGLPGKAYT RQQHIWLTGA NETESKIFSR AILAKSAHIQ TVLCIPLLDG IIEFGTTDRV  180
QEDLGLIQYV KGFFTDYRHQ PTPARSEHST SNPASTSSEQ FNFNSTPGLL SAMYSAAHPI  240
PHSSNLEKQN EEDEDDEEEE EEEDDDDEEN GSESDSQAET GRNSYADAAA TTVVMQDPIH  300
LCDPMIEGLV TTTAERSELV QHEMSEDIRI GSPDDVSNNN LDPDVRMFDI THGSEPGRKW  360
SADQLISGGG LQIPNSDTPQ NEELTREDSH YSQTVSTILQ QNSNQWPDYT TTAPPLGGGY  420
IGYTLSSSSS SSTTSQSAFA KWSNQNNHLL HLPPPLDVTS SPPQWRLKYI LFHVPYLHNK  480
SRDESCTRSR DGSEQGHNKL RKGSSAEDLS ANHVLAERRR REKLNERFIV LRSLVPFVTK  540
MDKASILGDT IEYVKQLKKK IQELELKNQS DIDQRMKNMV GFNVTSGGGS NQMVNDPIGF  600
PGSEKRKLRI VEGNAGAKAK VLEGPLVIGN IVQVSIIESD ALLELRCLYK EGILLEIMQT  660
LRDLRLEITA VQSSSSNGIF VAELRAKVKE NYIGKKPTIM EVKKAIHQVL SH

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	517	522	ERRRRE
2	518	523	RRRREK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G09820.1	4e-94	bHLH family protein