PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026456515.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

bHLH

Protein Properties

Length: 713aa MW: 79539.7 Da PI: 4.9524

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026456515.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	43.4	6.1e-14	513	559	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h +ErrRR+++N++f Lr+l+P +K++Ka+iL ++eY+k+L+ XP_026456515.1 513 NHVLAERRRREKLNERFIVLRSLVPFV-----TKMDKASILGDTIEYVKQLK 559 7999********************8.....8***************95 PP

Sequence ? help Back to Top
Protein Sequence Length: 713 aa Download sequence
MAVAHQPPNS RLQTMLQSAV QAVQWTYSLF WQVCPQQGRI LVWGDGYYNG AIKTRKTVQP 60 VEVSTEEASL QRSQQLRELY ESLSAEETNQ PTRRPCAALS PEDLTESEWF YLMSVSFSFP 120 PGVGLPGKAY TRQQHIWLTG ANETESKIFS RAILAKSAHI QTVLCIPLLD GIIEFGTTDR 180 VQEDLGLIQY VKGFFTDYRH QPTPARSEHS TSNPASTSSE QFNFNSTPGL LSAMYSAAHP 240 IPHSSNLEKQ NEEDEDDEEE EEEEDDDDEE NGSESDSQAE TGRNSYADAA ATTVVMQDPI 300 HLCDPMIEGL VTTTAERSEL VQHEMSEDIR IGSPDDVSNN NLDPDVRMFD ITHGSEPGRK 360 WSADQLISGG GLQIPNSDTP QNEELTREDS HYSQTVSTIL QQNSNQWPDY TTTAPPLGGG 420 YIGYTLSSSS SSSTTSQSAF AKWSNQNNHL LHLPPPLDVT SSPPQWRLKY ILFHVPYLHN 480 KSRDESCTRS RDGSEQGHNK LRKGSSAEDL SANHVLAERR RREKLNERFI VLRSLVPFVT 540 KMDKASILGD TIEYVKQLKK KIQELELKNQ SDIDQRMKNM VGFNVTSGGG SNQMVNDPIG 600 FPGSEKRKLR IVEGNAGAKA KVLEGPLVIG NIVQVSIIES DALLELRCLY KEGILLEIMQ 660 TLRDLRLEIT AVQSSSSNGI FVAELRAKVK ENYIGKKPTI MEVKKAIHQV LSH

Sequence ? help Back to Top

Protein Sequence Length: 713 aa Download sequence

MAVAHQPPNS RLQTMLQSAV QAVQWTYSLF WQVCPQQGRI LVWGDGYYNG AIKTRKTVQP  60
VEVSTEEASL QRSQQLRELY ESLSAEETNQ PTRRPCAALS PEDLTESEWF YLMSVSFSFP  120
PGVGLPGKAY TRQQHIWLTG ANETESKIFS RAILAKSAHI QTVLCIPLLD GIIEFGTTDR  180
VQEDLGLIQY VKGFFTDYRH QPTPARSEHS TSNPASTSSE QFNFNSTPGL LSAMYSAAHP  240
IPHSSNLEKQ NEEDEDDEEE EEEEDDDDEE NGSESDSQAE TGRNSYADAA ATTVVMQDPI  300
HLCDPMIEGL VTTTAERSEL VQHEMSEDIR IGSPDDVSNN NLDPDVRMFD ITHGSEPGRK  360
WSADQLISGG GLQIPNSDTP QNEELTREDS HYSQTVSTIL QQNSNQWPDY TTTAPPLGGG  420
YIGYTLSSSS SSSTTSQSAF AKWSNQNNHL LHLPPPLDVT SSPPQWRLKY ILFHVPYLHN  480
KSRDESCTRS RDGSEQGHNK LRKGSSAEDL SANHVLAERR RREKLNERFI VLRSLVPFVT  540
KMDKASILGD TIEYVKQLKK KIQELELKNQ SDIDQRMKNM VGFNVTSGGG SNQMVNDPIG  600
FPGSEKRKLR IVEGNAGAKA KVLEGPLVIG NIVQVSIIES DALLELRCLY KEGILLEIMQ  660
TLRDLRLEIT AVQSSSSNGI FVAELRAKVK ENYIGKKPTI MEVKKAIHQV LSH

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	518	523	ERRRRE
2	519	524	RRRREK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G09820.1	2e-93	bHLH family protein