PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026456511.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

WRKY

Protein Properties

Length: 454aa MW: 50588.7 Da PI: 9.269

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026456511.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	86.7	2e-27	210	271	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 ldDgynW+KYGqK++ g+++pr+YYrCt++ gC + k+v+rs++dp+++++tY+g+H+++ XP_026456511.1 210 LDDGYNWKKYGQKDILGAKYPRGYYRCTHRnvqGCIAIKQVQRSDKDPSYFTVTYQGRHTCT 271 59*************************98999************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 454 aa Download sequence
MESSSSNTLS YWDLKPLIMN ELTQAKDLLK QLQNDLDTSS TSTIASKLLV TKVICSFDNS 60 VSMLNRIKTD AQPTAASTTT TATVISPPGV INSMPIDSKV IDLTLTDKTP PPAAASAYRN 120 QTTGSTTAAA GGAAGSIERP ASIFENNPPR SDSRSDYEYN NNNNNNHPRS DSRSDYESDI 180 AKDQPKKRKV LPRWTENVRV CEQSGLEGPL DDGYNWKKYG QKDILGAKYP RGYYRCTHRN 240 VQGCIAIKQV QRSDKDPSYF TVTYQGRHTC TQASEDIPRN TSRSKHDQLN KCQDPKQKKT 300 EVLISFQTSS RDKSVEEISF AKSCQVRAKE LSLQKPTQLP KALEISIPKI NLTKEISNQQ 360 SSLAKEFSIQ KSSHTKEISN LQSCQTKEIG SLTKDFTLQR SSSAKDISNQ QSCITKEFSI 420 EKRCHAKEED ISIKKSCLTK ADLNTKLELR LSSF

Sequence ? help Back to Top

Protein Sequence Length: 454 aa Download sequence

MESSSSNTLS YWDLKPLIMN ELTQAKDLLK QLQNDLDTSS TSTIASKLLV TKVICSFDNS  60
VSMLNRIKTD AQPTAASTTT TATVISPPGV INSMPIDSKV IDLTLTDKTP PPAAASAYRN  120
QTTGSTTAAA GGAAGSIERP ASIFENNPPR SDSRSDYEYN NNNNNNHPRS DSRSDYESDI  180
AKDQPKKRKV LPRWTENVRV CEQSGLEGPL DDGYNWKKYG QKDILGAKYP RGYYRCTHRN  240
VQGCIAIKQV QRSDKDPSYF TVTYQGRHTC TQASEDIPRN TSRSKHDQLN KCQDPKQKKT  300
EVLISFQTSS RDKSVEEISF AKSCQVRAKE LSLQKPTQLP KALEISIPKI NLTKEISNQQ  360
SSLAKEFSIQ KSSHTKEISN LQSCQTKEIG SLTKDFTLQR SSSAKDISNQ QSCITKEFSI  420
EKRCHAKEED ISIKKSCLTK ADLNTKLELR LSSF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G11070.2	1e-40	WRKY family protein