PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026455889.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

AP2

Protein Properties

Length: 508aa MW: 56464.3 Da PI: 9.4424

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026455889.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	53.4	6.5e-17	155	204	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV++++++grW+++I+d + k+++lg f+ta Aa+a+++a+ k++g XP_026455889.1 155 SQYRGVTFYRRTGRWESHIWD------CgKQVYLGGFDTAHAAARAYDRAAIKFRG 204 78*****************......55**********************997 PP
2	AP2	42.9	1.2e-13	247	297	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV+ +k grW+A+ + +k+++lg f+t+ eAa+a+++a+ k +g XP_026455889.1 247 SKYRGVTLHK-CGRWEARMGQF--L-GKKYVYLGLFDTEVEAARAYDKAAIKCNG 297 89******.7**5553..2.26******99********99776 PP

Sequence ? help Back to Top
Protein Sequence Length: 508 aa Download sequence
MESTLDLNDS SRQTSMKDVE IIEEVEKGKG IGSVSNSSSS SVSQEDESLK RKSSKIFGFS 60 VTHDCSSTEI GEPMITRQFF PMEESDNSNT ITGASTGGGG GGFNTSSSTT SFPRAHWVGV 120 KFCQTEPVGA SKTSMEVISQ QPLKKSRRGP RSRSSQYRGV TFYRRTGRWE SHIWDCGKQV 180 YLGGFDTAHA AARAYDRAAI KFRGVEADIN FTFNDYEDDL KQMTNLTKEE FVHVLRRQST 240 GFPRGSSKYR GVTLHKCGRW EARMGQFLGK KYVYLGLFDT EVEAARAYDK AAIKCNGKEA 300 VTNFDPSIYD SELNAGAGSN KDHSLDLCLG SSPSSLEFKG NQPLPKFQSQ PNWSNSNNRG 360 FKLKLQDEQF RNNKQNNNPY FQTSNSNELS RYEQLRVIGE NPIFHHLQPP SHPQNYQLSS 420 SSTSSGSNGG SRVNVDTIEQ LQRRQQWSSS STSNKSNNNS NGWPCYISPS QPMFATTAAA 480 SSGFPSQVIK TPSWFPKING FQSLKRPT

Sequence ? help Back to Top

Protein Sequence Length: 508 aa Download sequence

MESTLDLNDS SRQTSMKDVE IIEEVEKGKG IGSVSNSSSS SVSQEDESLK RKSSKIFGFS  60
VTHDCSSTEI GEPMITRQFF PMEESDNSNT ITGASTGGGG GGFNTSSSTT SFPRAHWVGV  120
KFCQTEPVGA SKTSMEVISQ QPLKKSRRGP RSRSSQYRGV TFYRRTGRWE SHIWDCGKQV  180
YLGGFDTAHA AARAYDRAAI KFRGVEADIN FTFNDYEDDL KQMTNLTKEE FVHVLRRQST  240
GFPRGSSKYR GVTLHKCGRW EARMGQFLGK KYVYLGLFDT EVEAARAYDK AAIKCNGKEA  300
VTNFDPSIYD SELNAGAGSN KDHSLDLCLG SSPSSLEFKG NQPLPKFQSQ PNWSNSNNRG  360
FKLKLQDEQF RNNKQNNNPY FQTSNSNELS RYEQLRVIGE NPIFHHLQPP SHPQNYQLSS  420
SSTSSGSNGG SRVNVDTIEQ LQRRQQWSSS STSNKSNNNS NGWPCYISPS QPMFATTAAA  480
SSGFPSQVIK TPSWFPKING FQSLKRPT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G36920.1	1e-118	AP2 family protein