PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026455882.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family bHLH
Protein Properties Length: 428aa    MW: 46884.8 Da    PI: 6.2304
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026455882.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH49.48.4e-16212258455
                     HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                      hn  E+rRR+riN+++  L+ l+P++      K +Ka++L +A+eY+k+Lq
  XP_026455882.1 212 VHNLSEKRRRSRINEKMKALQNLIPNS-----NKTDKASMLDEAIEYLKQLQ 258
                     6*************************7.....5******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 428 aa     Download sequence    
MYEPCSSSSF TTTTTTSCPV LESDEISLFV QHLFHSSSSS SSSSSSSSST ITCTSSSSSS  60
IKQMPLSAQF AKSFQEDQQN RSCLTNHLPD HTHHNHNIHS DFRLRNDSSN LFLSSASAAG  120
SIYFPSSSSE IIKDSTTTTT TVISDTGGVN RDFDQKDSDA VNVSVKRRKF PVDNIDLDDY  180
DGESEEGLEG SEGPSKTVPS RSSSKRSRAA EVHNLSEKRR RSRINEKMKA LQNLIPNSNK  240
TDKASMLDEA IEYLKQLQLQ VQMLSMRNGL SLHPLYLPGV LQPPQMTQMR NMSFGEGNAL  300
PQHMNIGTGT HPVSQEAQNS FALSNQSTAL HQPMVLPNMT NIALPTTSFG LDSSLIQLHH  360
GQFQLSTASE EIYREDVPLP QQLNKSISTR NASASVPFDS RSSIVENTDT VESSVVRGNI  420
PQAMLPKD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G36930.13e-40bHLH family protein