PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026455745.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

SBP

Protein Properties

Length: 1088aa MW: 121244 Da PI: 7.581

Description

SBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026455745.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SBP	130	8.3e-41	165	242	1	78
--SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS SBP 1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78 +Cqv++C+ dls+ak+yhrrhkvCevhsk++++lv +++qrfCqqCsrfh lsefDe+krsCrrrLa+hn+rrrk+q+ XP_026455745.1 165 MCQVDDCKGDLSNAKDYHRRHKVCEVHSKTTKALVGKQMQRFCQQCSRFHPLSEFDEGKRSCRRRLAGHNRRRRKTQP 242 6**************************************************************************997 PP

Sequence ? help Back to Top
Protein Sequence Length: 1088 aa Download sequence
MEDVGAQIAH PMYIHQTLPG RFCEAPNMAR KRDLPWQSPM FIQQQQQQQQ FQQQQHQRFQ 60 NSKGNWNPNG WNWDHVTFVG KPSDAEVMQI RPAATPMVVQ EQKSKVEENR IPVAMKKDSV 120 DEENLTLKLG GNLYSTEDNA SRPNKRVRSG SPGGGGGAAG GNYPMCQVDD CKGDLSNAKD 180 YHRRHKVCEV HSKTTKALVG KQMQRFCQQC SRFHPLSEFD EGKRSCRRRL AGHNRRRRKT 240 QPEDVSSRMV IPGNQDNPSN GNLDVVNLLT AIARLQENNA EKSVPDKDRL IQILSKMATP 300 PVPSNSVTRN SLPGNFDLNV SQEVSSEHQN KMTGGRNTSA PSTMDMLTVL STLAASSPDA 360 LAFLSQRSSI SSENDKTKVN CLEKAADQNL PRQPVPGFSS AGGERSSTSY QSPVEVSDGH 420 AQGTQPSLQL QLFSSSPEND SPPKMGSAYK YFSSDSSNPM ESPSSSPPVV QKFFPMQTTS 480 EIMKHERMSI SGEDNGAVEA STTRGWSSPL ELFKGPKGRV EDRSIQNLPY QGGYASSSGS 540 DHSPSSSNSD AQNRTGRIIF KLFDKDPSSF PGTLRNQILE WLSHSPSEME SYIRPGCVIL 600 SIYVLMPCTA WDQLQEDLLQ RVNFLVRDLD PGFWSSGRFL VHTDRQLASH KDGKVRLCKS 660 WRTWSAPEIM SVSPLAVVCG QETSLMLRGR NLSVPGTKIH CTYMGGYLSK EVLGSEGTVY 720 DDTSSESFDF PSGFPTVLGR CFIEVENGFK GNSFPVIIAD AAICHELRLL EFEFKEDGRV 780 GDNASEDQMQ DSECPRSRED CLYFLNELGW LFQRMNSTYS DCPSFSHTRF KFLITFSIER 840 DWCTLIKTLL DILVERNTGK DGLSKDSLEM LSEVHLLNRA VKRKCRKMVD LLIHYFVSSS 900 TDSSKKYLFP PNQTGPGGIT PLHLAACTLD SKEMVDALTS DPQEIGLNCW NSLLDTNGQS 960 PFAYASARNN HYYNRLVSRK LIDRKRGQVS ISVMEEDTSL DNSWIVAEES VKATPHPTES 1020 KPCGKCSIAA TRYYKRMPGY QGLLHRPYVH SMLAIAAVCV CVCLFLRGSP DIGSVAPFKW 1080 ENLHFGTS

Sequence ? help Back to Top

Protein Sequence Length: 1088 aa Download sequence

MEDVGAQIAH PMYIHQTLPG RFCEAPNMAR KRDLPWQSPM FIQQQQQQQQ FQQQQHQRFQ  60
NSKGNWNPNG WNWDHVTFVG KPSDAEVMQI RPAATPMVVQ EQKSKVEENR IPVAMKKDSV  120
DEENLTLKLG GNLYSTEDNA SRPNKRVRSG SPGGGGGAAG GNYPMCQVDD CKGDLSNAKD  180
YHRRHKVCEV HSKTTKALVG KQMQRFCQQC SRFHPLSEFD EGKRSCRRRL AGHNRRRRKT  240
QPEDVSSRMV IPGNQDNPSN GNLDVVNLLT AIARLQENNA EKSVPDKDRL IQILSKMATP  300
PVPSNSVTRN SLPGNFDLNV SQEVSSEHQN KMTGGRNTSA PSTMDMLTVL STLAASSPDA  360
LAFLSQRSSI SSENDKTKVN CLEKAADQNL PRQPVPGFSS AGGERSSTSY QSPVEVSDGH  420
AQGTQPSLQL QLFSSSPEND SPPKMGSAYK YFSSDSSNPM ESPSSSPPVV QKFFPMQTTS  480
EIMKHERMSI SGEDNGAVEA STTRGWSSPL ELFKGPKGRV EDRSIQNLPY QGGYASSSGS  540
DHSPSSSNSD AQNRTGRIIF KLFDKDPSSF PGTLRNQILE WLSHSPSEME SYIRPGCVIL  600
SIYVLMPCTA WDQLQEDLLQ RVNFLVRDLD PGFWSSGRFL VHTDRQLASH KDGKVRLCKS  660
WRTWSAPEIM SVSPLAVVCG QETSLMLRGR NLSVPGTKIH CTYMGGYLSK EVLGSEGTVY  720
DDTSSESFDF PSGFPTVLGR CFIEVENGFK GNSFPVIIAD AAICHELRLL EFEFKEDGRV  780
GDNASEDQMQ DSECPRSRED CLYFLNELGW LFQRMNSTYS DCPSFSHTRF KFLITFSIER  840
DWCTLIKTLL DILVERNTGK DGLSKDSLEM LSEVHLLNRA VKRKCRKMVD LLIHYFVSSS  900
TDSSKKYLFP PNQTGPGGIT PLHLAACTLD SKEMVDALTS DPQEIGLNCW NSLLDTNGQS  960
PFAYASARNN HYYNRLVSRK LIDRKRGQVS ISVMEEDTSL DNSWIVAEES VKATPHPTES  1020
KPCGKCSIAA TRYYKRMPGY QGLLHRPYVH SMLAIAAVCV CVCLFLRGSP DIGSVAPFKW  1080
ENLHFGTS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G20980.1	0.0	SBP family protein