PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026455713.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

AP2

Protein Properties

Length: 705aa MW: 78333 Da PI: 7.044

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026455713.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	50.8	4.1e-16	343	402	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrd.pse.ng..kr.krfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV++++++gr++A+++d ++ g ++ ++++lg ++ +e+Aa+a++ a++k++g XP_026455713.1 343 SQYRGVTRHRWTGRYEAHLWDnSCKkEGqtRKgRQVYLGGYDMEEKAARAYDLAALKYWG 402 78*****************988886678446***********************98 PP
2	AP2	38.1	3.8e-12	447	499	3	55
AP2 3 ykGV...rwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 y+GV +++++ grW A+I + +k +lg+f t eeAa+a++ a+ k++g XP_026455713.1 447 YRGVtrsHRHHQHGRWQARIGRVAG---NKDLYLGTFSTQEEAAEAYDIAAIKFRG 499 9988888999999988532...5**********************997 PP

Sequence ? help Back to Top
Protein Sequence Length: 705 aa Download sequence
MKSMSNDSNS NNNSSSNNNN WLGFSLSPHM TMEVPSESHH THTHNQQHHH QTSSTAAVSN 60 NTVPTSFFLS PPHMNNSEIC YGVGTCHENS GYYSHLSVMP LKSDGSLCIM EALSRSQSEG 120 MVPTSSPKLE NFLGSGAMGN PHHYGNSERE TMALSLDSMY YHQNTETQNN RQQPQQHSLN 180 FLQQPQDHHI QVQQHTYYSG LTGHEIYQTS LEEENKGTHL SNSSLQLPPM GEDGISGLKN 240 WVARHYPTNN SSMEQKMNTA GCLTNDGSGS GSVNAMGYGD LQSLSLSMSP GSQSSCITAS 300 QQISPTGTAE CVAMETNKRG SSKMGQKQPV HRKSIDTFGQ RTSQYRGVTR HRWTGRYEAH 360 LWDNSCKKEG QTRKGRQVYL GGYDMEEKAA RAYDLAALKY WGPSTHINFP LENYQDELEE 420 MKNMSRQEYV AHLRRKSSGF SRGASMYRGV TRSHRHHQHG RWQARIGRVA GNKDLYLGTF 480 STQEEAAEAY DIAAIKFRGV NAVTNFDITR YDVERISASN TLLAGELAKR HKDVEPVVEV 540 VEQHSSVQNG GEGNLPEENA AGPDWKMVRN HSQQQQQQLQ QQQQQQTASV ENLEHKPFET 600 NNYRNLPFSM SLHDLMGIDA MNSNQQGLED SNRSSAHLSN TSSLVTSLSS SREGSPEKNG 660 LFGGQSSTSN KFSPSSANSW IPSAQLKPTA ITMAHLPMFA AWTDA

Sequence ? help Back to Top

Protein Sequence Length: 705 aa Download sequence

MKSMSNDSNS NNNSSSNNNN WLGFSLSPHM TMEVPSESHH THTHNQQHHH QTSSTAAVSN  60
NTVPTSFFLS PPHMNNSEIC YGVGTCHENS GYYSHLSVMP LKSDGSLCIM EALSRSQSEG  120
MVPTSSPKLE NFLGSGAMGN PHHYGNSERE TMALSLDSMY YHQNTETQNN RQQPQQHSLN  180
FLQQPQDHHI QVQQHTYYSG LTGHEIYQTS LEEENKGTHL SNSSLQLPPM GEDGISGLKN  240
WVARHYPTNN SSMEQKMNTA GCLTNDGSGS GSVNAMGYGD LQSLSLSMSP GSQSSCITAS  300
QQISPTGTAE CVAMETNKRG SSKMGQKQPV HRKSIDTFGQ RTSQYRGVTR HRWTGRYEAH  360
LWDNSCKKEG QTRKGRQVYL GGYDMEEKAA RAYDLAALKY WGPSTHINFP LENYQDELEE  420
MKNMSRQEYV AHLRRKSSGF SRGASMYRGV TRSHRHHQHG RWQARIGRVA GNKDLYLGTF  480
STQEEAAEAY DIAAIKFRGV NAVTNFDITR YDVERISASN TLLAGELAKR HKDVEPVVEV  540
VEQHSSVQNG GEGNLPEENA AGPDWKMVRN HSQQQQQQLQ QQQQQQTASV ENLEHKPFET  600
NNYRNLPFSM SLHDLMGIDA MNSNQQGLED SNRSSAHLSN TSSLVTSLSS SREGSPEKNG  660
LFGGQSSTSN KFSPSSANSW IPSAQLKPTA ITMAHLPMFA AWTDA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G37750.1	1e-125	AP2 family protein