PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026455396.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

FAR1

Protein Properties

Length: 976aa MW: 110315 Da PI: 8.102

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026455396.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	84.3	2e-26	280	369	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk.tekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 +fYn+YAke GFs+rks+ ++s+ ++++++r++vC ++g+r++++++ + k r+r etr++C+a + +k++ + kw v+k+++eHnH l+ XP_026455396.1 280 EFYNAYAKEKGFSIRKSHIQRSRVDRSVISREYVCANQGFRSTNDRRyKGKVVRPRRETRVDCRAAMSIKRR-STKWIVDKFHKEHNHGLV 369 6***************************************999886778899**************.9************996 PP

Sequence ? help Back to Top
Protein Sequence Length: 976 aa Download sequence
MKNKENNPTS PPQTTNQQPL LQPNPHPHPH PPPYTFMPSF YPPPPPWSTF PGPWSVPPPP 60 SGFPLTMPIP TPPHNLPQHS ASGHSLPSPP PPPYAFWPPP PPMMMGPVIS TSQNHIAVPT 120 TGNTQESVVP PTGLHRAEGK VPPEHQHSEQ ALNSPLRRRP VTRRSAAQDL ATDNASSPGL 180 DQLLDTVSPS LTATKGSQSR RLRSQKIKDK EEKSNAGQQD KVEGDAAFVD ENNSVDVTSL 240 EEVDIAAETS GREDDNVPLP KLGSEPFVGL RFSSEDEAYE FYNAYAKEKG FSIRKSHIQR 300 SRVDRSVISR EYVCANQGFR STNDRRYKGK VVRPRRETRV DCRAAMSIKR RSTKWIVDKF 360 HKEHNHGLVD PAKAEKLRSH RKITQTTKSV IDTLYKCRIG PSKIIDVLTK AASEENTVEI 420 SGLDLMKYVK RKPKNNIAAD CYRVLEYFQK IQAVDPGFFY VVEVGDSRSM RSMFWADSRS 480 RDAYKQFGDV MVFDHVCRMN KDLFPFVSFV GVNHHRQPVL FACGLLADET VESFVWLFKT 540 LLRAMSNCHP TSVITKQDKA IMVAMGKVFP NTRQRICMLH IGKNELGNLS DVFNMHPAFQ 600 EEYKRCIYNC QKPEEFESGW KQLLVKYNLK ENSWLYGMYD QRHNWVPLYL RNTFFAGMST 660 TQLAEGMNSY FDGFLHERTP LNEFIEQYEL AVVRRREEET DEDFITMYTS AGSSSKNPIE 720 EQAAKVYTRN MFTLFGHEFS ESSGCNVRKV DDKDECTSRY LVGRYGDKDD EMSFVTFNSI 780 SKDTNCSCQM FEFEGILCKH VLKLFQDLNV VELPAKYTLK RWTMIARYGG PCGDEAECIS 840 EDTTAVNVWM LKETAVKFVE IGLSSADRNS AAMNIIEEGL KNISLVNAST NDLHPEDSVG 900 CSDQGEKLID TTSSEPQPIK TKERQASVKE KLGVKQVMKK NRKCSTCKKS GHYTSTCPKG 960 PVDQSQTSAN GDQRQA

Sequence ? help Back to Top

Protein Sequence Length: 976 aa Download sequence

MKNKENNPTS PPQTTNQQPL LQPNPHPHPH PPPYTFMPSF YPPPPPWSTF PGPWSVPPPP  60
SGFPLTMPIP TPPHNLPQHS ASGHSLPSPP PPPYAFWPPP PPMMMGPVIS TSQNHIAVPT  120
TGNTQESVVP PTGLHRAEGK VPPEHQHSEQ ALNSPLRRRP VTRRSAAQDL ATDNASSPGL  180
DQLLDTVSPS LTATKGSQSR RLRSQKIKDK EEKSNAGQQD KVEGDAAFVD ENNSVDVTSL  240
EEVDIAAETS GREDDNVPLP KLGSEPFVGL RFSSEDEAYE FYNAYAKEKG FSIRKSHIQR  300
SRVDRSVISR EYVCANQGFR STNDRRYKGK VVRPRRETRV DCRAAMSIKR RSTKWIVDKF  360
HKEHNHGLVD PAKAEKLRSH RKITQTTKSV IDTLYKCRIG PSKIIDVLTK AASEENTVEI  420
SGLDLMKYVK RKPKNNIAAD CYRVLEYFQK IQAVDPGFFY VVEVGDSRSM RSMFWADSRS  480
RDAYKQFGDV MVFDHVCRMN KDLFPFVSFV GVNHHRQPVL FACGLLADET VESFVWLFKT  540
LLRAMSNCHP TSVITKQDKA IMVAMGKVFP NTRQRICMLH IGKNELGNLS DVFNMHPAFQ  600
EEYKRCIYNC QKPEEFESGW KQLLVKYNLK ENSWLYGMYD QRHNWVPLYL RNTFFAGMST  660
TQLAEGMNSY FDGFLHERTP LNEFIEQYEL AVVRRREEET DEDFITMYTS AGSSSKNPIE  720
EQAAKVYTRN MFTLFGHEFS ESSGCNVRKV DDKDECTSRY LVGRYGDKDD EMSFVTFNSI  780
SKDTNCSCQM FEFEGILCKH VLKLFQDLNV VELPAKYTLK RWTMIARYGG PCGDEAECIS  840
EDTTAVNVWM LKETAVKFVE IGLSSADRNS AAMNIIEEGL KNISLVNAST NDLHPEDSVG  900
CSDQGEKLID TTSSEPQPIK TKERQASVKE KLGVKQVMKK NRKCSTCKKS GHYTSTCPKG  960
PVDQSQTSAN GDQRQA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	1e-148	FAR1 family protein