PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026455137.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

FAR1

Protein Properties

Length: 524aa MW: 61012.3 Da PI: 9.5538

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026455137.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	22.9	2.8e-07	2	32	59	90
FAR1 59 rtgCkaklkvkkekdgkwevtkleleHnHela 90 rt+ ka +++kk+ +++w+v+ +++eHnH+l+ XP_026455137.1 2 RTDYKAVMMIKKR-NDRWVVSGVVEEHNHKLV 32 78889******.9*************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 524 aa Download sequence
MRTDYKAVMM IKKRNDRWVV SGVVEEHNHK LVSPSKRHNL RSLRKISSSQ KQQIVNFRLA 60 GVKTNQLINY LEVENGGVNN IGFLPKDARN YLSTKRQLEL KYGDAQVVLD YFERQQMENP 120 SFLYSIQVDS EGQMTIFLGD YYFDPKSRMD YYYFGDIVCF DLTYSTNRYD MPFVPIVGIN 180 HHHQTVLFDA ALLYSESEDS FEWVMKTWMR AMHGKTPKVI LTYQESTIGG AIASVLPGTR 240 HRYCLWHISR NAMKNLSNVI KEFVSEFSNC LYGYETVEQF EHGWTTMLEN HELQNNKWLL 300 NLYEKREYWA SVYTRDTHLE GFVVENIQNL PSQHVLKRWT RDAKSGTVVF DQDEEISADR 360 RDAVTIRYSK LCQDAINIVV KGSTFVPVYN VAVQVLQKAL EDIEKAIKDS QVNAESQSDA 420 ILNENNRMHV ENVGNLTNAR KLVGDPPIVK RKGKNGAMKS WIDKLNNKRK SNETKARKKL 480 RESTRLEPND VNTQEKQPRI KKKRKSKDSF REINSQPESL HGMF

Sequence ? help Back to Top

Protein Sequence Length: 524 aa Download sequence

MRTDYKAVMM IKKRNDRWVV SGVVEEHNHK LVSPSKRHNL RSLRKISSSQ KQQIVNFRLA  60
GVKTNQLINY LEVENGGVNN IGFLPKDARN YLSTKRQLEL KYGDAQVVLD YFERQQMENP  120
SFLYSIQVDS EGQMTIFLGD YYFDPKSRMD YYYFGDIVCF DLTYSTNRYD MPFVPIVGIN  180
HHHQTVLFDA ALLYSESEDS FEWVMKTWMR AMHGKTPKVI LTYQESTIGG AIASVLPGTR  240
HRYCLWHISR NAMKNLSNVI KEFVSEFSNC LYGYETVEQF EHGWTTMLEN HELQNNKWLL  300
NLYEKREYWA SVYTRDTHLE GFVVENIQNL PSQHVLKRWT RDAKSGTVVF DQDEEISADR  360
RDAVTIRYSK LCQDAINIVV KGSTFVPVYN VAVQVLQKAL EDIEKAIKDS QVNAESQSDA  420
ILNENNRMHV ENVGNLTNAR KLVGDPPIVK RKGKNGAMKS WIDKLNNKRK SNETKARKKL  480
RESTRLEPND VNTQEKQPRI KKKRKSKDSF REINSQPESL HGMF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	2e-81	FAR1 family protein