PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026455108.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family GRAS
Protein Properties Length: 593aa    MW: 65783.1 Da    PI: 4.684
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026455108.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS435.83.2e-1332245932374
            GRAS   2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshl 96 
                     ++lLl+cA a+s++++++a a+++ l++++s +gdp +R+aay++e+Laar+a s++ ly+al+++  +   ss++l+a+++++ev+P++kf+++
  XP_026455108.1 224 KQLLLKCAAAISEHNMKEAAAIISDLRQMVSIQGDPSERIAAYMVEGLAARMATSGQALYRALKCKVPP---SSDRLSAMQILFEVCPCFKFGFM 315
                     689*****************************************************************9...9********************** PP

            GRAS  97 taNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrledl 189
                     +aN aI eav+ e+ vHiiDfdi+qG Q++ L+q+LasRp++pp++R+Tgv++pes+      le +g+ L+kfAe++g++fef + +a +++++
  XP_026455108.1 316 AANGAIEEAVKDEDSVHIIDFDINQGSQYMQLIQTLASRPGKPPRIRLTGVDDPESVqrTVGGLEIIGQLLEKFAESVGISFEFLP-LAAKTSEV 409
                     *******************************************************99778889***********************.5999**** PP

            GRAS 190 eleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerik 284
                     ++ +Lr++p+Eal+Vn+++qlh+++desvs+ ++rd++L++vk+l Pk+v+vveq++++n+++F  rf+ea  yy a+f+sl+a+l+r+s +r++
  XP_026455108.1 410 TPGMLRCQPKEALIVNFAFQLHHMPDESVSTVNQRDQLLRMVKGLGPKLVTVVEQDVNTNTAPFYPRFVEAYTYYLAVFESLDATLARNSPDRMN 504
                     *********************************************************************************************** PP

            GRAS 285 vErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
                     vE+++l+r+ivn++aceg+er+er e ++kWr+r+++aGF + pls+++ +++k  l+++ ++ ++ ++e+g+l +gW++++Lv++SaW+
  XP_026455108.1 505 VEKQCLARDIVNIIACEGEERIERYEVAGKWRARMKMAGFVSCPLSTHVDSTIKVSLKQYCDR-FNTKQEQGALNFGWESKSLVVASAWK 593
                     *************************************************************66.*************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 593 aa     Download sequence    
MSLFRSADQS GTTYEYVLKS GNSGISNPIF SSDKQKFKYR PEFYSEDYDQ RYFSESPSES  60
FPASRVGFLP SRVPATTLHP HELSSYKLLS SSSTSAAESK SFNSSSATVP SYPYQSYPAV  120
EYLDGQSSDF AMIDYDEDVV RLKLQELERE LLVDIDGDDD DFGIDPSMDF DSEWGDSFAN  180
IVLPTSPKES SSSDSNISSI SNNKDTQELH IAPSPGLCSP ITSKQLLLKC AAAISEHNMK  240
EAAAIISDLR QMVSIQGDPS ERIAAYMVEG LAARMATSGQ ALYRALKCKV PPSSDRLSAM  300
QILFEVCPCF KFGFMAANGA IEEAVKDEDS VHIIDFDINQ GSQYMQLIQT LASRPGKPPR  360
IRLTGVDDPE SVQRTVGGLE IIGQLLEKFA ESVGISFEFL PLAAKTSEVT PGMLRCQPKE  420
ALIVNFAFQL HHMPDESVST VNQRDQLLRM VKGLGPKLVT VVEQDVNTNT APFYPRFVEA  480
YTYYLAVFES LDATLARNSP DRMNVEKQCL ARDIVNIIAC EGEERIERYE VAGKWRARMK  540
MAGFVSCPLS THVDSTIKVS LKQYCDRFNT KQEQGALNFG WESKSLVVAS AWK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G21450.10.0GRAS family protein