PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026454918.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family bHLH
Protein Properties Length: 287aa    MW: 31499 Da    PI: 5.4315
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026454918.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH39.78.9e-13223268655
                     HHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   6 nerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     +++Er RR ri +++ +L+el+P+     +k  + a++Le+AveY+k Lq
  XP_026454918.1 223 SIAERVRRTRISDRIRKLQELVPNM----DKQTNTADMLEEAVEYVKLLQ 268
                     689*********************7....688***************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 287 aa     Download sequence    
MGFNGGGGES NRGLTRFWSA PSTWLDTLIQ PDDDVDDEGI NTTTNPISIP KPQQPKLTPP  60
LPPSSNLPPQ IPTLSRNNSA SINYIASSAA ASPVTNVFFD STATSAGDLG FLRQNSSPAE  120
LLARLTSLPA SVGSDGFLSS YGGSGNYEYN LSSCLDFPSN NNNKRSRDSD FQQESPKISP  180
HPLKGEQSGD YGNYGDMEME KLFEDSVPCR VRAKRGCATH PRSIAERVRR TRISDRIRKL  240
QELVPNMDKQ TNTADMLEEA VEYVKLLQKQ IQELSEHQQN CKCLVRG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G35460.12e-55bHLH family protein