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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
| Basic Information? help Back to Top | |||||||||
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| TF ID | XP_026454647.1 | ||||||||
| Organism | |||||||||
| Taxonomic ID | |||||||||
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
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| Family | GeBP | ||||||||
| Protein Properties | Length: 292aa MW: 33510 Da PI: 8.7294 | ||||||||
| Description | GeBP family protein | ||||||||
| Gene Model |
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| Signature Domain? help Back to Top | |||||||
|---|---|---|---|---|---|---|---|
| No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
| 1 | DUF573 | 51.2 | 3.5e-16 | 103 | 198 | 3 | 97 |
DUF573 3 fqrlwseeDeivlLqGlidfkaktgkspsddidafyefvkksisfk.vsksqlveKirrLKkKfkkkvkk.aksgkepsfskehdqkifelskki 95
++rl s eDeiv+L Gl ++ +++g p ++f +++k+s++f+ v+ksq+v + +LKk+f k +k +++ +p+f+ ++d k + + k i
XP_026454647.1 103 ISRLISVEDEIVILEGLREW-KRKGWFPLLARQEFTDYIKDSLHFNpVNKSQVVRQVWQLKKRFCKFLEKkNDDDADPVFEDPNDYKLYLIMKDI 196
5799****************.77899******************9659****************9988874678899****************** PP
DUF573 96 Wg 97
Wg
XP_026454647.1 197 WG 198
*8 PP
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| Sequence ? help Back to Top |
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| Protein Sequence Length: 292 aa Download sequence |
MGRMNHPSSC PEDPPSAASS SEEEVENSKS EASEKGEAGK EVEISGSEAS EGEAEDESDS 60 EFVESSENHK RKRTKAANKP TSSSSSKSKS SNIVKKRRKR TPISRLISVE DEIVILEGLR 120 EWKRKGWFPL LARQEFTDYI KDSLHFNPVN KSQVVRQVWQ LKKRFCKFLE KKNDDDADPV 180 FEDPNDYKLY LIMKDIWGDE YPVIRKKNVK YDDDNGRKVK AKRELLDKLP VLGIKDCVSE 240 EGLKLIGDAK VKKFEKKWKK LHQEELHLNL KRKELIEEMT QALLAAVKAS KD |
| Nucleic Localization Signal ? help Back to Top | |||
|---|---|---|---|
| No. | Start | End | Sequence |
| 1 | 95 | 99 | KKRRK |
| 2 | 95 | 125 | KKRRKRTPISRLISVEDEIVILEGLREWKRK |
| 3 | 96 | 126 | KKRRKRTPISRLISVEDEIVILEGLREWKRK |
| 4 | 97 | 127 | KKRRKRTPISRLISVEDEIVILEGLREWKRK |
| 5 | 217 | 224 | RKVKAKRE |
| Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
|---|---|---|---|---|---|---|
| Hit ID | E-value | Description | ||||
| AT1G61730.1 | 3e-07 | GeBP family protein | ||||
| ©2010-2022, Center
for Bioinformatics, Peking University Last Modified: 2022-12-08 Questions or Comments, please contact  |
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