PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026454430.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family HB-other
Protein Properties Length: 374aa    MW: 41760.7 Da    PI: 4.3726
Description HB-other family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026454430.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox31.23.6e-10305352653
                     S--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHH CS
        Homeobox   6 tftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRa 53 
                     +++k q+e+Le+++ +++ p+ +++  + + ++L++++V  WF  +Ra
  XP_026454430.1 305 RLKKVQIETLERVYLRSKRPTNAMISSIVHVTNLPKKRVVKWFEDKRA 352
                     57899******************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 374 aa     Download sequence    
MAVASSSATV VFGVLSSPKN LKSLCKFKPF LLPLLSHSPL TQSTLTFSAR KNNPNSATTS  60
SSKKKKNSSS NNSKSKKKQT LTKKSEVEVV DDIDEDAIEA LFNQLEEDLK SDGSFADGDD  120
DLTEEDLARL EKELKEAFGE DADLFEMLQL SEENIQNSDD AEDGEEDEED EEEEEIDDDD  180
DDDDEEESPV QLKNWQLRRL ATALKIGRRK ISIQTLAAEL CLDRAVVLEL LREPPPNLLM  240
LSAALPDIVV PKPIEIEAKP IEVSTETVVD VSEPSVEASD GVVEPDPKVK VPVHALQSRW  300
SAQKRLKKVQ IETLERVYLR SKRPTNAMIS SIVHVTNLPK KRVVKWFEDK RAEDGIAEDR  360
LPYQRSKSET VSTS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G11270.11e-49HB-other family protein