PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026454271.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

TCP

Protein Properties

Length: 290aa MW: 28761.9 Da PI: 9.8649

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026454271.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	118.4	8.6e-37	28	105	2	78
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec.eaess 78 a+kk + +++h+kv+gR+RR+R+++ caar+F+L++eLG+++d++tieWLl++a+p+i+++tgt++++a+++ ++ss XP_026454271.1 28 AVKKPPAKDRHSKVDGRGRRIRMPIICAARVFQLTRELGHKSDGQTIEWLLRAAEPSIIAATGTGTTPANFSsISVSS 105 789****************************************************************99877322222 PP

Sequence ? help Back to Top
Protein Sequence Length: 290 aa Download sequence
MSDGGTSNNN GALTDPQRQP QNGSGALAVK KPPAKDRHSK VDGRGRRIRM PIICAARVFQ 60 LTRELGHKSD GQTIEWLLRA AEPSIIAATG TGTTPANFSS ISVSSARGGG GGSLFCSTTS 120 SSIDQKTAGQ IMSPAPFLLG KRLRTDGSDD ADGGGGDGNS GVGPGGGGGI GGVGGGGGFW 180 AVPARPDFGQ VWSFSGGPEM VLPMPMAVTP VPMSMALAGS SQQLISGRFL QQSIGGGAGG 240 NGGGGGGGEG GSAASGAGRM GNYLTQGHLN LLASLSGNSP NSVRREDEPN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G23280.1	2e-58	TCP family protein