PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026453901.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

bHLH

Protein Properties

Length: 479aa MW: 52404.6 Da PI: 7.2641

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026453901.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	15.1	4.2e-05	358	398	10	55
HHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 10 rrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 r RR+ri ++f L+e+lP++ + + ++Y+k+Lq XP_026453901.1 358 RIRRARITERFKSLQEILPNS-----DQANRDDLMDDIIDYVKYLQ 398 89******************6.....34555566677777777776 PP

Sequence ? help Back to Top
Protein Sequence Length: 479 aa Download sequence
MDDVGRKRGR HNFVEMMQTA SDEFNGKEGS PNEFSDSSEA SSYESNDKEA SSSSELDGKE 60 TVHRPNHKKA KSTTTDPLGD FSKLGVLDKR DDLNCSNAQE PLSDLPGECS RRVSENRVSA 120 LPTRPTVSNA GTARDVSQGS HVSSLSRQSI LARSGYGRDI PRSVLVDSSV RKSAATGFGR 180 DIPFAVPFDP LPTGSTLIHG GSARRVSDAI PFRSLPTIPT AYHSGYARDI ALAVPITVRS 240 TTDVRELTGI RQGLLHNHTG GASNLGDSFG HNLPTPDEMQ SIHQMLNGNY LQASQITSHG 300 VEFLKTLLSN KVPILAQDPA SAAPGLTQDF HQGPKVTVAV PSYCSKQRIN YVNRKSGRIR 360 RARITERFKS LQEILPNSDQ ANRDDLMDDI IDYVKYLQLQ IKSLSQSTLE DETADHSPFI 420 NLEGFGHYLH NQGTLVSEPL EDMVGMLMQV NKPAFTQLLE SRGLYVKPMA LAGKTIYKP

Sequence ? help Back to Top

Protein Sequence Length: 479 aa Download sequence

MDDVGRKRGR HNFVEMMQTA SDEFNGKEGS PNEFSDSSEA SSYESNDKEA SSSSELDGKE  60
TVHRPNHKKA KSTTTDPLGD FSKLGVLDKR DDLNCSNAQE PLSDLPGECS RRVSENRVSA  120
LPTRPTVSNA GTARDVSQGS HVSSLSRQSI LARSGYGRDI PRSVLVDSSV RKSAATGFGR  180
DIPFAVPFDP LPTGSTLIHG GSARRVSDAI PFRSLPTIPT AYHSGYARDI ALAVPITVRS  240
TTDVRELTGI RQGLLHNHTG GASNLGDSFG HNLPTPDEMQ SIHQMLNGNY LQASQITSHG  300
VEFLKTLLSN KVPILAQDPA SAAPGLTQDF HQGPKVTVAV PSYCSKQRIN YVNRKSGRIR  360
RARITERFKS LQEILPNSDQ ANRDDLMDDI IDYVKYLQLQ IKSLSQSTLE DETADHSPFI  420
NLEGFGHYLH NQGTLVSEPL EDMVGMLMQV NKPAFTQLLE SRGLYVKPMA LAGKTIYKP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G30980.1	6e-19	bHLH family protein