PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026453517.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

C2H2

Protein Properties

Length: 615aa MW: 67170.9 Da PI: 8.0143

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026453517.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	16.9	1.8e-05	94	116	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++C+k F r nL+ H r H XP_026453517.1 94 FVCEICNKGFQRDQNLQLHRRGH 116 89*******************88 PP
2	zf-C2H2	11.8	0.00075	170	192	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 +kC +C+k + +s+ k H +t+ XP_026453517.1 170 WKCDKCSKKYAVQSDWKAHSKTC 192 58*****************9998 PP

Sequence ? help Back to Top
Protein Sequence Length: 615 aa Download sequence
MSNISGDSGS FSSGNTTQEV VAQQHLYDQQ QLQDHLTHDG SSNSITTTMV NSNISPPLQL 60 PSVLKKKRSL PGTPDPSAEV IALSPTTLMA TNRFVCEICN KGFQRDQNLQ LHRRGHNLPW 120 KLKQRSTTEI RKRVYICPEP SCVHHNPARA LGDLTGIKKH FCRKHGEKKW KCDKCSKKYA 180 VQSDWKAHSK TCGTREYKCD CGTIFSRRDS FITHRAFCDA LAEENNKVNQ GLMSNMEVKI 240 QGQVSDLMSS MPINNTSPEI NESDATNPLR SHSHSDLMVM PLKPLTMTGG MFSSCSGTLF 300 NGHRSNSSAN SSCLQLNANN GLSSFDGLDD GKIGRQIVGT AHMSATALLQ KAAQMGATAS 360 SNINSSPMMQ KSFVSSMAGL DNSHHQFNSV RSSSASPFVE NSNNASSLDY MQTSQSDHPV 420 HDGMVNSGGG FINQFLQKGL SHQEMSTPKF IDPIKGSGNS NDICSSPSGM NNMAMFTGLF 480 MGGDQQHGFL KNTELQQQQH DQNSGTTSMS TTPVRSNVNS GLVNIPGAGI GGKNPIGFSR 540 FGDNNDDDMM TVDFLGVGGL QLRTSTHPNF SSEQQQRMDQ FAAISQQRLH NSFQLQAAEM 600 SSHNNQAMEK PIWDT

Sequence ? help Back to Top

Protein Sequence Length: 615 aa Download sequence

MSNISGDSGS FSSGNTTQEV VAQQHLYDQQ QLQDHLTHDG SSNSITTTMV NSNISPPLQL  60
PSVLKKKRSL PGTPDPSAEV IALSPTTLMA TNRFVCEICN KGFQRDQNLQ LHRRGHNLPW  120
KLKQRSTTEI RKRVYICPEP SCVHHNPARA LGDLTGIKKH FCRKHGEKKW KCDKCSKKYA  180
VQSDWKAHSK TCGTREYKCD CGTIFSRRDS FITHRAFCDA LAEENNKVNQ GLMSNMEVKI  240
QGQVSDLMSS MPINNTSPEI NESDATNPLR SHSHSDLMVM PLKPLTMTGG MFSSCSGTLF  300
NGHRSNSSAN SSCLQLNANN GLSSFDGLDD GKIGRQIVGT AHMSATALLQ KAAQMGATAS  360
SNINSSPMMQ KSFVSSMAGL DNSHHQFNSV RSSSASPFVE NSNNASSLDY MQTSQSDHPV  420
HDGMVNSGGG FINQFLQKGL SHQEMSTPKF IDPIKGSGNS NDICSSPSGM NNMAMFTGLF  480
MGGDQQHGFL KNTELQQQQH DQNSGTTSMS TTPVRSNVNS GLVNIPGAGI GGKNPIGFSR  540
FGDNNDDDMM TVDFLGVGGL QLRTSTHPNF SSEQQQRMDQ FAAISQQRLH NSFQLQAAEM  600
SSHNNQAMEK PIWDT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G50700.1	1e-102	C2H2 family protein