PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026453426.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

AP2

Protein Properties

Length: 579aa MW: 64566.4 Da PI: 6.6493

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026453426.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	45.9	1.4e-14	278	337	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrd.pse.ng..kr.krfslgkfgtaeeAakaaiaarkkleg 55 s y+GV++++++gr++A+++d + g ++ ++++lg ++ +++Aa+a++ a++k++g XP_026453426.1 278 SIYRGVTRHRWTGRYEAHLWDnSCRrEGqsRKgRQVYLGGYDKEDKAARAYDLAALKYWG 337 57*****************666664477446******99***********98 PP
2	AP2	52.4	1.3e-16	382	431	3	55
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 y+GV++++++grW A+I + +k +lg+fgt+eeAa+a++ a+ k++g XP_026453426.1 382 YRGVTRHHQQGRWQARIGRVAG---NKDLYLGTFGTEEEAAEAYDIAAIKFRG 431 9*************988532...5**********************998 PP

Sequence ? help Back to Top
Protein Sequence Length: 579 aa Download sequence
MTPTNWLSFS LSPLDLYQST NTTHRHQDAA PTTTATTPKY MPYESLSSDS SHQYYNFDSL 60 YANNNNDYWT NSMRAATNQD SHGYTAVEEI QDIKEIKTGD FSFLTSLNHQ QIVPKLEDFL 120 GGDSVSASSM HHQQHSQTET QEDSSLSNVY HEQQSSCYFG GDQQDLKAIT GFHQGTFSSA 180 NSGSEVDDSS VSVTGSMGFH PHHHQQALSL ESSRNDLLYS DTTTPTTNNN NNNSNQRLSL 240 AVSNNKTQNS EKAIVAVGDA NSESCKKITP DTFGQRTSIY RGVTRHRWTG RYEAHLWDNS 300 CRREGQSRKG RQVYLGGYDK EDKAARAYDL AALKYWGPTA TTNFPVTNYS KEMEDMKTMT 360 KQEFIASLRR KSSGFSRGAS MYRGVTRHHQ QGRWQARIGR VAGNKDLYLG TFGTEEEAAE 420 AYDIAAIKFR GLNAVTNFEM NRYNVEAITN NELPIGGAAK RLKLSLEAES ETQSPQVHRE 480 QPPTGSCCSS ISTVPGVYHD SAATLYHQNL FHQLSYTNGT SSHPVIAPIM SSPSEFYGRG 540 MIYGSTTPFN ISSHFNNSIN NTEANLNQPW NMTASYNNN

Sequence ? help Back to Top

Protein Sequence Length: 579 aa Download sequence

MTPTNWLSFS LSPLDLYQST NTTHRHQDAA PTTTATTPKY MPYESLSSDS SHQYYNFDSL  60
YANNNNDYWT NSMRAATNQD SHGYTAVEEI QDIKEIKTGD FSFLTSLNHQ QIVPKLEDFL  120
GGDSVSASSM HHQQHSQTET QEDSSLSNVY HEQQSSCYFG GDQQDLKAIT GFHQGTFSSA  180
NSGSEVDDSS VSVTGSMGFH PHHHQQALSL ESSRNDLLYS DTTTPTTNNN NNNSNQRLSL  240
AVSNNKTQNS EKAIVAVGDA NSESCKKITP DTFGQRTSIY RGVTRHRWTG RYEAHLWDNS  300
CRREGQSRKG RQVYLGGYDK EDKAARAYDL AALKYWGPTA TTNFPVTNYS KEMEDMKTMT  360
KQEFIASLRR KSSGFSRGAS MYRGVTRHHQ QGRWQARIGR VAGNKDLYLG TFGTEEEAAE  420
AYDIAAIKFR GLNAVTNFEM NRYNVEAITN NELPIGGAAK RLKLSLEAES ETQSPQVHRE  480
QPPTGSCCSS ISTVPGVYHD SAATLYHQNL FHQLSYTNGT SSHPVIAPIM SSPSEFYGRG  540
MIYGSTTPFN ISSHFNNSIN NTEANLNQPW NMTASYNNN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G10510.1	1e-123	AP2 family protein