PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026453284.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

bHLH

Protein Properties

Length: 432aa MW: 47603.2 Da PI: 7.2217

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026453284.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	24.3	5.5e-08	348	388	9	54
HHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 9 ErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 r+RR+ri +++ L++l+P K++ a++L +A +Y+k L XP_026453284.1 348 ARQRRERISERIRVLQKLVPGG-----SKMDTASMLDEAANYLKFL 388 69****************95.....5**************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 432 aa Download sequence
MDILAGWDNL PRTVTNTSNI QPRFWSSQQH DIGGNNSMVS SNNIVGGGSM MNNQGDGFFH 60 PNHPHHHELL QGMKTSASSL HSNRVVQQLA PAALDSVNVV GLNSSNNLLM NKQQELSNVE 120 LCSSPMMNRP YNVISPYNGV FTATKVGSLM ESLDCLMSVT KNTGTERITS VEDLWDFGSG 180 SSVVSSGESQ NNKANEESKW QVNELDETVS QGSSNPNCVN INGVISSNTN KSNSLKRKDG 240 NGVRENGSYP LFDLKSDCFT TEAGFQLVAE NPQKSKRSRL EQSSNINFQH PDSSVSFTDE 300 PDTEAIAQMK EMIYRAAAFR PVNLGLEVVD KPRRKNVKIS CDPQTVAARQ RRERISERIR 360 VLQKLVPGGS KMDTASMLDE AANYLKFLKS QVKALETIGQ KLQSMNPTSL STPQFDINSA 420 FSMQTLFQFP KP

Sequence ? help Back to Top

Protein Sequence Length: 432 aa Download sequence

MDILAGWDNL PRTVTNTSNI QPRFWSSQQH DIGGNNSMVS SNNIVGGGSM MNNQGDGFFH  60
PNHPHHHELL QGMKTSASSL HSNRVVQQLA PAALDSVNVV GLNSSNNLLM NKQQELSNVE  120
LCSSPMMNRP YNVISPYNGV FTATKVGSLM ESLDCLMSVT KNTGTERITS VEDLWDFGSG  180
SSVVSSGESQ NNKANEESKW QVNELDETVS QGSSNPNCVN INGVISSNTN KSNSLKRKDG  240
NGVRENGSYP LFDLKSDCFT TEAGFQLVAE NPQKSKRSRL EQSSNINFQH PDSSVSFTDE  300
PDTEAIAQMK EMIYRAAAFR PVNLGLEVVD KPRRKNVKIS CDPQTVAARQ RRERISERIR  360
VLQKLVPGGS KMDTASMLDE AANYLKFLKS QVKALETIGQ KLQSMNPTSL STPQFDINSA  420
FSMQTLFQFP KP

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	330	336	DKPRRKN
2	331	336	KPRRKN
3	349	354	RQRRER

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G21330.1	2e-55	bHLH family protein