PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_026453060.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
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Family | M-type_MADS | ||||||||
Protein Properties | Length: 228aa MW: 26113.8 Da PI: 5.0245 | ||||||||
Description | M-type_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 64.5 | 1.1e-20 | 44 | 92 | 1 | 49 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEE CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyey 49 k i + +r+vtfskRr+g++KKA EL+ L++a++++ +fs++gkl+++ XP_026453060.1 44 KMIHDRKKRSVTFSKRRQGLFKKADELCRLTGADISLSVFSPSGKLFTF 92 67999*******************************************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 228 aa Download sequence |
MKLCFFSGMD AFHWVLNFSR LNILWAVLCC GIIMGTGRKK IEIKMIHDRK KRSVTFSKRR 60 QGLFKKADEL CRLTGADISL SVFSPSGKLF TFGCSNSDEV LYRFPVKEEE KEVDGNNSRS 120 ENGDGFWWNN LNIDELDTLE KVDAVTEQLL QVQNLVVKRK EELLAALSTS SAAAKETTTS 180 NMEDSCMFSV KQEDDSWFPS LTSGYMNEFD ELLKDFYVDQ KMQQLPAY |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 38 | 52 | RKKIEIKMIHDRKKR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G36590.1 | 9e-21 | M-type_MADS family protein |