PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026452799.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

bHLH

Protein Properties

Length: 545aa MW: 61434 Da PI: 7.323

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026452799.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	32.6	1.5e-10	369	411	4	51
HHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYI 51 h++ Er+RR+++N++f L++llP+ + K +K++ L + +Y+ XP_026452799.1 369 HHKMSERKRREKLNDSFLALKSLLPPgS------KKDKVSLLSITRDYL 411 69***********************955......788888888888887 PP

Sequence ? help Back to Top
Protein Sequence Length: 545 aa Download sequence
MDSVFYLDEE VRTRFLQNLA QSLGCTYLCL WSYYPLPANY LFSTNGVLNY NAIVHQPASS 60 SSASIASQAI IQTLFDAYRS TPHIIQNGLV PGLAFLEGIP YLEFKELELL NRASTDIQRQ 120 FYQEARIKLA AFASCKSGAM EIGMSSLDQS KNIEMEMMNW FPDDFILQQS KLVRNQQVQL 180 PQRIDQSWPS SSSSSLKSLV SSPEYSPLLF SAPTAFPPQE FIKEVITSDH QTSKPNLVAA 240 QSIDQQIEHA YNILGNVQFP NPENVDAALT KAMLAVLSST PASSSLPHQH QHQQTQACSN 300 HLSQEVGVFK RYKPEDNLLA LANNKLKTNY GGQNMLKRAI IFYKNMQMRK RIMEEQLAQG 360 YRPTSSQLHH KMSERKRREK LNDSFLALKS LLPPGSKKDK VSLLSITRDY LVTLKDEIKE 420 LKRRNRFLET QLAPTKPTLI TSGNDPEMGA ASTSSDITVE IQLTEASEPS ILSEEREVDL 480 QVNVRSRYCD FMSLIRCLLE FLNQVDGVTL EFMEGNTTPA QVPNSSYGVV IRLKIKALGG 540 SHFFY

Sequence ? help Back to Top

Protein Sequence Length: 545 aa Download sequence

MDSVFYLDEE VRTRFLQNLA QSLGCTYLCL WSYYPLPANY LFSTNGVLNY NAIVHQPASS  60
SSASIASQAI IQTLFDAYRS TPHIIQNGLV PGLAFLEGIP YLEFKELELL NRASTDIQRQ  120
FYQEARIKLA AFASCKSGAM EIGMSSLDQS KNIEMEMMNW FPDDFILQQS KLVRNQQVQL  180
PQRIDQSWPS SSSSSLKSLV SSPEYSPLLF SAPTAFPPQE FIKEVITSDH QTSKPNLVAA  240
QSIDQQIEHA YNILGNVQFP NPENVDAALT KAMLAVLSST PASSSLPHQH QHQQTQACSN  300
HLSQEVGVFK RYKPEDNLLA LANNKLKTNY GGQNMLKRAI IFYKNMQMRK RIMEEQLAQG  360
YRPTSSQLHH KMSERKRREK LNDSFLALKS LLPPGSKKDK VSLLSITRDY LVTLKDEIKE  420
LKRRNRFLET QLAPTKPTLI TSGNDPEMGA ASTSSDITVE IQLTEASEPS ILSEEREVDL  480
QVNVRSRYCD FMSLIRCLLE FLNQVDGVTL EFMEGNTTPA QVPNSSYGVV IRLKIKALGG  540
SHFFY

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	374	379	ERKRRE
2	375	380	RKRREK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G56960.1	7e-29	bHLH family protein