PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026452793.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

HSF

Protein Properties

Length: 361aa MW: 40241.3 Da PI: 5.1844

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026452793.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	116.1	2.2e-36	56	147	2	102
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellek 96 Fl+k+y+++ed+++++++sws+ nsfvv+d+++f++++LpkyFkhsnf+SF+RQLn+YgF+kv++e+ weF++++F g+k+ll++ XP_026452793.1 56 FLTKTYDMVEDPDTNSIVSWSKARNSFVVWDSHDFSTTLLPKYFKHSNFSSFIRQLNTYGFRKVDSEK---------WEFANEWFLGGQKHLLKN 141 9**************************************************************999.........************** PP XXXXXX CS HSF_DNA-bind 97 ikrkks 102 ikr+++ XP_026452793.1 142 IKRRRH 147 *975 PP

Sequence ? help Back to Top
Protein Sequence Length: 361 aa Download sequence
MEGVTVKQEE DIVTIVGDGS SSICSLNSAS PPPTASSSSM VVLPMEGLHE IGPPPFLTKT 60 YDMVEDPDTN SIVSWSKARN SFVVWDSHDF STTLLPKYFK HSNFSSFIRQ LNTYGFRKVD 120 SEKWEFANEW FLGGQKHLLK NIKRRRHISK NTQQGGGGGT DGCVEYAGGL GLESEVDTLR 180 KERSYLMVEI LNLREKQKRS LDELVSIQER LQGTERKQQL TMSFLAKAFK NPAFVQQLIE 240 MSEKKKELTG GVAKKRRLPP SGSIENFQNE LVSAAMDTVE NGPSVVFQNQ KMDSSTLNAN 300 SGDIDDKYWN ELLIDDFMGA NKAEHVVGGH SPLEIDAEVE DFWCKGVHGL VEEMAYLGST 360 A

Sequence ? help Back to Top

Protein Sequence Length: 361 aa Download sequence

MEGVTVKQEE DIVTIVGDGS SSICSLNSAS PPPTASSSSM VVLPMEGLHE IGPPPFLTKT  60
YDMVEDPDTN SIVSWSKARN SFVVWDSHDF STTLLPKYFK HSNFSSFIRQ LNTYGFRKVD  120
SEKWEFANEW FLGGQKHLLK NIKRRRHISK NTQQGGGGGT DGCVEYAGGL GLESEVDTLR  180
KERSYLMVEI LNLREKQKRS LDELVSIQER LQGTERKQQL TMSFLAKAFK NPAFVQQLIE  240
MSEKKKELTG GVAKKRRLPP SGSIENFQNE LVSAAMDTVE NGPSVVFQNQ KMDSSTLNAN  300
SGDIDDKYWN ELLIDDFMGA NKAEHVVGGH SPLEIDAEVE DFWCKGVHGL VEEMAYLGST  360
A

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	139	145	LKNIKRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G26150.1	1e-92	HSF family protein