PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026452734.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

TCP

Protein Properties

Length: 377aa MW: 41673 Da PI: 7.5668

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026452734.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	98.6	1.1e-30	46	185	2	133
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt.......ssssaseceaesssssasnsssg. 88 g+kdrhsk+ T +g RdRRvRls+++a++f+dLqd+LG+ ++sk eWL+++a a +l+++ + +++ e + XP_026452734.1 46 SGGKDRHSKVLTTKGVRDRRVRLSVSTAIQFYDLQDRLGYVQPSKVFEWLIKAAANASTQLPSLnaafldaPKQPSDEKRI------------Hr 128 689*************************************************************66555442222211111............11 PP TCP 89 ..............kaaksaakskksqksaasalnlakesrakarararertrekmrik 133 ++ sa ++k++++ +as l+ + s + ra+arert++++ ++ XP_026452734.1 129 tvnmeptlymdeveIEMDSAYNPKQQHNLSASLLACSSTS--EIRAKARERTANDKEKE 185 1223345666677344555558888888888666666644..44444445554444333 PP

Sequence ? help Back to Top
Protein Sequence Length: 377 aa Download sequence
MKIGRKGSAD QHQQKQDAED EEAAFGNPIT NRAWQSSRIF KVSKASGGKD RHSKVLTTKG 60 VRDRRVRLSV STAIQFYDLQ DRLGYVQPSK VFEWLIKAAA NASTQLPSLN AAFLDAPKQP 120 SDEKRIHRTV NMEPTLYMDE VEIEMDSAYN PKQQHNLSAS LLACSSTSEI RAKARERTAN 180 DKEKEKPDEA PHYQHTSSFT ELLTGAQQNN RTHRPLAPTQ IDDYFSVGDF GGATLRNNNI 240 YSSSGFSTQT DYGSSPQAIP CIMEVPTSPL SPFTVTADHH NSHHHHQNQQ HPEMRQFSSL 300 PEHLIPDTAA ATANAGSNRV ASDLSHSPLF HHFKQRFSSS PSDGPNIPFF MGNVGNAASC 360 SITPEGNQFL SGFRGGL

Sequence ? help Back to Top

Protein Sequence Length: 377 aa Download sequence

MKIGRKGSAD QHQQKQDAED EEAAFGNPIT NRAWQSSRIF KVSKASGGKD RHSKVLTTKG  60
VRDRRVRLSV STAIQFYDLQ DRLGYVQPSK VFEWLIKAAA NASTQLPSLN AAFLDAPKQP  120
SDEKRIHRTV NMEPTLYMDE VEIEMDSAYN PKQQHNLSAS LLACSSTSEI RAKARERTAN  180
DKEKEKPDEA PHYQHTSSFT ELLTGAQQNN RTHRPLAPTQ IDDYFSVGDF GGATLRNNNI  240
YSSSGFSTQT DYGSSPQAIP CIMEVPTSPL SPFTVTADHH NSHHHHQNQQ HPEMRQFSSL  300
PEHLIPDTAA ATANAGSNRV ASDLSHSPLF HHFKQRFSSS PSDGPNIPFF MGNVGNAASC  360
SITPEGNQFL SGFRGGL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G30210.2	5e-40	TCP family protein