PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026452616.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family bHLH
Protein Properties Length: 358aa    MW: 40523.6 Da    PI: 5.9544
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026452616.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH40.84e-13182227555
                     HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     h ++ErrRR+++ ++f  L  l+P++     +Kl+Ka++L  A++Y+k+L+
  XP_026452616.1 182 HIMAERRRREKLSQRFIALSALVPNL-----TKLDKASVLGDAIKYLKQLE 227
                     899**********************9.....9*****************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 358 aa     Download sequence    
MDTSSVPSIH WLPELAYMED PDFMNQFFDE YKDQNVESVL DGNFYSFSSD SCNSSIIDLE  60
NNINSYFDGK TGIHQPVKSL KTESSNSSTT TENLWTTTPD ASPAGSPPPS SRIISFGCSG  120
NPSVLDLYGG TNNSPVDGIM KPKDEYLLPR NMKQQQNYVK KAGKGTKRPN PDTDTNSPSY  180
DHIMAERRRR EKLSQRFIAL SALVPNLTKL DKASVLGDAI KYLKQLEEKV KILEEQTTKK  240
TVESVVFVNK RSRVTADDDI TSSYFDDQYV NSRPEVEVKV SNKNVLIRIH CEKHKGSLVK  300
ILAEIEKYHL TVVNSNVMVF GDSALDITIH AKLDEKFCME IKDFVRNLRS EFLRFMQD
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1186191ERRRRE
2187192RRRREK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37850.14e-56bHLH family protein