PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026452600.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

NAC

Protein Properties

Length: 450aa MW: 51151.3 Da PI: 6.8388

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026452600.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	170.5	5.5e-53	8	137	1	129
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk..kvka.eekewyfFskrdkkyatgkrknratksgyWkatgkdkev 92 +ppGfrFhPtdeel+++yLkkkv+ +k++l evi+evd++k+ePwdL++ ++ + ++ewyfFs++d+ky+tg+r+nrat++g+Wkatg+dk + XP_026452600.1 8 VPPGFRFHPTDEELLHYYLKKKVSFEKFDL-EVIREVDLNKMEPWDLQErcRIGStPQNEWYFFSHKDRKYPTGSRTNRATSAGFWKATGRDKCI 101 69**************************.99**********963433332556********************************** PP NAM 93 lskkgelvglkktLvfykgrapkgektdWvmheyrle 129 + + +++g++ktLvfy+grap+g+ktdW+mheyrle XP_026452600.1 102 RN-SFKKIGMRKTLVFYRGRAPHGQKTDWIMHEYRLE 137 9.8899***************************85 PP

Sequence ? help Back to Top
Protein Sequence Length: 450 aa Download sequence
MASSNGGVPP GFRFHPTDEE LLHYYLKKKV SFEKFDLEVI REVDLNKMEP WDLQERCRIG 60 STPQNEWYFF SHKDRKYPTG SRTNRATSAG FWKATGRDKC IRNSFKKIGM RKTLVFYRGR 120 APHGQKTDWI MHEYRLEDID DAQGNVSEDG WVVCRVFKKK NLFKVAGNDH LQGGGSSSSI 180 GNADHQHHHH LLMNNATANN QQRATLTANN NSIHNHQEYL RRQHGHQQIN TSFDLYKPVD 240 LALHYSHLSA PSSDPHHHHH YMQQQQQTNT DHDLLQIQQP MGGGSYHDYS SANPAMLKQL 300 LSNQRDCDIG GDSLVVASEQ VHEYPPNAAV IEMGLDIVGT TTTSCEPTAT QQMIRGGRDD 360 EHDQHPHNHQ QGLNDWAMLD RLVMTNNNPN TNHDIGQSQE ESPSSKGMAG FGDHQDEVHQ 420 QQTNASSSST QQINPLSLRG EMMDFWGYGK

Sequence ? help Back to Top

Protein Sequence Length: 450 aa Download sequence

MASSNGGVPP GFRFHPTDEE LLHYYLKKKV SFEKFDLEVI REVDLNKMEP WDLQERCRIG  60
STPQNEWYFF SHKDRKYPTG SRTNRATSAG FWKATGRDKC IRNSFKKIGM RKTLVFYRGR  120
APHGQKTDWI MHEYRLEDID DAQGNVSEDG WVVCRVFKKK NLFKVAGNDH LQGGGSSSSI  180
GNADHQHHHH LLMNNATANN QQRATLTANN NSIHNHQEYL RRQHGHQQIN TSFDLYKPVD  240
LALHYSHLSA PSSDPHHHHH YMQQQQQTNT DHDLLQIQQP MGGGSYHDYS SANPAMLKQL  300
LSNQRDCDIG GDSLVVASEQ VHEYPPNAAV IEMGLDIVGT TTTSCEPTAT QQMIRGGRDD  360
EHDQHPHNHQ QGLNDWAMLD RLVMTNNNPN TNHDIGQSQE ESPSSKGMAG FGDHQDEVHQ  420
QQTNASSSST QQINPLSLRG EMMDFWGYGK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G10350.1	1e-120	NAC family protein