PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026452453.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

HSF

Protein Properties

Length: 368aa MW: 41535.4 Da PI: 7.3435

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026452453.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	112.3	3.4e-35	34	125	2	102
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellek 96 Fl+k+ye+++d++++++isw e++++fvv+ + efa+++Lp++Fkh+nf+SFvRQLn+YgF+k+ ++ weF ++ F+kg+k+ll++ XP_026452453.1 34 FLTKTYELVDDPSTDHVISWAEDNTTFVVWRPPEFARDLLPNFFKHNNFSSFVRQLNTYGFRKIVPDR---------WEFGNEFFRKGEKHLLCE 119 9***************************************************************99.........************** PP XXXXXX CS HSF_DNA-bind 97 ikrkks 102 i+r+k+ XP_026452453.1 120 IHRRKT 125 **86 PP

Sequence ? help Back to Top
Protein Sequence Length: 368 aa Download sequence
MALMLDNGAC HDNVLLCLDS STTSLSQKSV PAPFLTKTYE LVDDPSTDHV ISWAEDNTTF 60 VVWRPPEFAR DLLPNFFKHN NFSSFVRQLN TYGFRKIVPD RWEFGNEFFR KGEKHLLCEI 120 HRRKTITISH HHHQQNGQVS MNNYYNPHSS ISGSSGLCFG AFPSAQLLNI SNSDSDEQAM 180 MNRASDHLSP ISSPRVINSV STLSEENERL RQSNSMLMSE LTHMKKLYND IIYFVQNHVR 240 SVPPPLPPSS NSSPLLGFHN RQYSSTNQVA HHQQVLKDQR FTSAAPTTNH PTTTTTNSSN 300 SNSTSLTMLE EISDDNDNQM KLFGILLPQS KKRSHPDQPT SVTIKSSKAR LVQDHDLGLN 360 LMSSYSPC

Sequence ? help Back to Top

Protein Sequence Length: 368 aa Download sequence

MALMLDNGAC HDNVLLCLDS STTSLSQKSV PAPFLTKTYE LVDDPSTDHV ISWAEDNTTF  60
VVWRPPEFAR DLLPNFFKHN NFSSFVRQLN TYGFRKIVPD RWEFGNEFFR KGEKHLLCEI  120
HRRKTITISH HHHQQNGQVS MNNYYNPHSS ISGSSGLCFG AFPSAQLLNI SNSDSDEQAM  180
MNRASDHLSP ISSPRVINSV STLSEENERL RQSNSMLMSE LTHMKKLYND IIYFVQNHVR  240
SVPPPLPPSS NSSPLLGFHN RQYSSTNQVA HHQQVLKDQR FTSAAPTTNH PTTTTTNSSN  300
SNSTSLTMLE EISDDNDNQM KLFGILLPQS KKRSHPDQPT SVTIKSSKAR LVQDHDLGLN  360
LMSSYSPC

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	331	335	KKRSH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G46264.1	4e-95	HSF family protein