PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026452430.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

bHLH

Protein Properties

Length: 561aa MW: 63482.3 Da PI: 7.1622

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026452430.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	32.5	1.5e-10	369	411	4	51
HHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYI 51 h++ Er+RR+++N++f L++llP+ + K +K++ L + +Y+ XP_026452430.1 369 HHKMSERKRREKLNDSFLALKSLLPPgS------KKDKVSLLSITRDYL 411 69***********************955......788888888888887 PP

Sequence ? help Back to Top
Protein Sequence Length: 561 aa Download sequence
MDSVFYLDEE VRTRFLQNLA QSLGCTYLCL WSYYPLPANY LFSTNGLLNY NAIVHQPASS 60 SSASIPSQAI IQTLFDAYRS TPHIIQNGLV PGLAFLEGIP YLEFKESELL NRASTDIQRQ 120 FYQEARIKLA AFVSCKSCEM EIGMSSLDQS KNIEMEMMNW FPDDFIPQQS KLLRNQQVQL 180 PQRIDQSWPS SSSSSLKSLV SSPEYSPLLF SAPTAFPPQE FIKEVITSDH QTSKPNLVAA 240 QSIDQQIEHA YNILGNVQFP NPENVDAALT KAMLAVLSST PASSSLPHQH RHQQTQACSN 300 HLSQEVGAFK RYKPEDNLLA LANNKLKTNY GGQNMLKRAI IFYKNMHMRK RIMEEPLAQG 360 YRPTSSQLHH KMSERKRREK LNDSFLALKS LLPPGSKKDK VSLLSITRDY LVTLKDEIKE 420 LKRRNRFLET QLAPTELTLI TSGNDPEMGA ASTSSDITVE IQLTETSEPS IPSEEREVDL 480 QVNVKSRHCD FMSLIRRLLE FLNQVDGVIL EFMEGNTTPS QVPNSSYAVV FRLKIKACQQ 540 HVFEESAFKE AIRRIIGDAA K

Sequence ? help Back to Top

Protein Sequence Length: 561 aa Download sequence

MDSVFYLDEE VRTRFLQNLA QSLGCTYLCL WSYYPLPANY LFSTNGLLNY NAIVHQPASS  60
SSASIPSQAI IQTLFDAYRS TPHIIQNGLV PGLAFLEGIP YLEFKESELL NRASTDIQRQ  120
FYQEARIKLA AFVSCKSCEM EIGMSSLDQS KNIEMEMMNW FPDDFIPQQS KLLRNQQVQL  180
PQRIDQSWPS SSSSSLKSLV SSPEYSPLLF SAPTAFPPQE FIKEVITSDH QTSKPNLVAA  240
QSIDQQIEHA YNILGNVQFP NPENVDAALT KAMLAVLSST PASSSLPHQH RHQQTQACSN  300
HLSQEVGAFK RYKPEDNLLA LANNKLKTNY GGQNMLKRAI IFYKNMHMRK RIMEEPLAQG  360
YRPTSSQLHH KMSERKRREK LNDSFLALKS LLPPGSKKDK VSLLSITRDY LVTLKDEIKE  420
LKRRNRFLET QLAPTELTLI TSGNDPEMGA ASTSSDITVE IQLTETSEPS IPSEEREVDL  480
QVNVKSRHCD FMSLIRRLLE FLNQVDGVIL EFMEGNTTPS QVPNSSYAVV FRLKIKACQQ  540
HVFEESAFKE AIRRIIGDAA K

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	374	379	ERKRRE
2	375	380	RKRREK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G56960.1	7e-32	bHLH family protein