PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_026452295.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
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Family | AP2 | ||||||||
Protein Properties | Length: 292aa MW: 32403.5 Da PI: 9.5824 | ||||||||
Description | AP2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 41.8 | 2.6e-13 | 90 | 148 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrd.pse.ng.kr.krfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV++d ++ ++ A+ +d + g ++ k+++lg ++ ++ Aaka++ a++k+ g XP_026452295.1 90 SQYRGVTRDIRKAKYKAQFWDgSCRkEGiRKgKQVYLGVYDEEDTAAKAYDLAALKYLG 148 78****************99965555558446**********99************988 PP | |||||||
2 | AP2 | 34 | 7.3e-11 | 193 | 239 | 3 | 55 |
AP2 3 ykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55 ykGVr++ +rW A I+ +kr +lg+fgt +eAa+ ++ a+ k +g XP_026452295.1 193 YKGVRRCG--KRWQAVIKSaA-----NKRSYLGTFGTQQEAAEVYDIAAIKSRG 239 9***9987..6*****98844.....6**********************98666 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 292 aa Download sequence |
MKCGDSTSRG EISPQLLDLN SEWVVEGDSG GSDERRIFGG SEERKLELKL GPPCEVNKIP 60 ISLLFTSTLT STTTTNNTSH FNYTKRQKIS QYRGVTRDIR KAKYKAQFWD GSCRKEGIRK 120 GKQVYLGVYD EEDTAAKAYD LAALKYLGPT ARINFPLSNY QKEIIEMENM KKEEYVATLK 180 RKSTGFSRGV SMYKGVRRCG KRWQAVIKSA ANKRSYLGTF GTQQEAAEVY DIAAIKSRGA 240 SAVTNFPTSN YDVEHICSNA TLIGGDITKH PSPQNSSSSI AAIENESVVV TN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G72570.1 | 1e-57 | AP2 family protein |